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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
48.8
nTPM
Monaco:
133.7
nTPM
Schmiedel:
56.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
48.8
HPA sample
nTPM
gdT-cell nTPM: 37.5
Samples: 6
Max nTPM: 46.7
Min nTPM: 31.3
P10809_1007
31.3
P10809_1022
46.7
P10809_1041
36.3
P10809_1060
31.5
P10809_1077
37.9
P10809_1098
41.5
MAIT T-cell nTPM: 48.9
Samples: 6
Max nTPM: 81.7
Min nTPM: 35.7
P10809_1006
40.7
P10809_1024
81.7
P10809_1043
44.0
P10809_1062
44.7
P10809_1083
46.3
P10809_1097
35.7
Memory CD4 T-cell nTPM: 41.7
Samples: 6
Max nTPM: 44.6
Min nTPM: 35.7
P10809_1014
35.7
P10809_1026
43.4
P10809_1045
44.6
P10809_1064
43.8
P10809_1086
41.2
P10809_1113
41.2
Memory CD8 T-cell nTPM: 44.8
Samples: 5
Max nTPM: 54.7
Min nTPM: 37.5
P10809_1012
37.5
P10809_1027
46.4
P10809_1046
40.5
P10809_1065
44.9
P10809_1111
54.7
Naive CD4 T-cell nTPM: 38.1
Samples: 6
Max nTPM: 53.3
Min nTPM: 31.0
P10809_1015
37.5
P10809_1030
31.0
P10809_1049
35.4
P10809_1068
36.8
P10809_1085
53.3
P10809_1112
34.7
Naive CD8 T-cell nTPM: 42.5
Samples: 6
Max nTPM: 63.8
Min nTPM: 29.2
P10809_1016
29.2
P10809_1031
63.8
P10809_1050
38.7
P10809_1069
39.5
P10809_1087
51.9
P10809_1110
32.1
T-reg nTPM: 48.9
Samples: 6
Max nTPM: 64.8
Min nTPM: 30.2
P10809_1018
35.9
P10809_1037
64.4
P10809_1056
64.8
P10809_1075
30.2
P10809_1094
52.1
P10809_1106
45.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
133.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 108.5
Samples: 4
Max nTPM: 125.2
Min nTPM: 84.5
RHH5202_R3573
125.2
RHH5230_R3602
119.7
RHH5259_R3631
84.5
RHH5288_R3660
104.6
Effector memory CD8 T-cell nTPM: 116.1
Samples: 4
Max nTPM: 124.8
Min nTPM: 106.1
RHH5203_R3574
112.0
RHH5231_R3603
121.6
RHH5260_R3632
106.1
RHH5289_R3661
124.8
MAIT T-cell nTPM: 129.4
Samples: 4
Max nTPM: 173.0
Min nTPM: 101.8
RHH5233_R3605
123.6
RHH5205_R3576
119.0
RHH5262_R3634
101.8
RHH5297_R3663
173.0
Memory CD4 T-cell TFH nTPM: 95.9
Samples: 4
Max nTPM: 115.0
Min nTPM: 85.1
RHH5300_R3666
94.8
RHH5236_R3608
115.0
RHH5265_R3637
85.1
RHH5208_R3579
88.8
Memory CD4 T-cell Th1 nTPM: 89.3
Samples: 4
Max nTPM: 105.9
Min nTPM: 69.4
RHH5210_R3581
87.4
RHH5302_R3668
94.5
RHH5238_R3610
69.4
RHH5267_R3639
105.9
Memory CD4 T-cell Th1/Th17 nTPM: 117.3
Samples: 4
Max nTPM: 137.1
Min nTPM: 88.2
RHH5303_R3669
137.1
RHH5211_R3582
134.7
RHH5239_R3611
88.2
RHH5268_R3640
109.3
Memory CD4 T-cell Th17 nTPM: 119.6
Samples: 4
Max nTPM: 141.0
Min nTPM: 96.3
RHH5304_R3670
126.4
RHH5212_R3583
96.3
RHH5240_R3612
141.0
RHH5269_R3641
114.5
Memory CD4 T-cell Th2 nTPM: 109.7
Samples: 4
Max nTPM: 146.4
Min nTPM: 91.9
RHH5305_R3671
91.9
RHH5213_R3584
146.4
RHH5241_R3613
99.4
RHH5270_R3642
101.2
Naive CD4 T-cell nTPM: 87.1
Samples: 4
Max nTPM: 107.1
Min nTPM: 63.6
RHH5306_R3672
100.9
RHH5214_R3585
107.1
RHH5242_R3614
76.7
RHH5271_R3643
63.6
Naive CD8 T-cell nTPM: 88.7
Samples: 4
Max nTPM: 112.9
Min nTPM: 70.7
RHH5201_R3572
112.9
RHH5229_R3601
70.7
RHH5258_R3630
99.6
RHH5287_R3659
71.7
Non-Vd2 gdTCR nTPM: 133.7
Samples: 4
Max nTPM: 158.5
Min nTPM: 116.5
RHH5235_R3607
116.5
RHH5264_R3636
129.7
RHH5207_R3578
158.5
RHH5299_R3665
130.1
T-reg nTPM: 111.3
Samples: 4
Max nTPM: 128.7
Min nTPM: 95.3
RHH5301_R3667
95.3
RHH5237_R3609
111.7
RHH5266_R3638
109.4
RHH5209_R3580
128.7
Terminal effector memory CD4 T-cell nTPM: 106.7
Samples: 2
Max nTPM: 121.1
Min nTPM: 92.2
RHH5243_R3615
92.2
RHH5272_R3644
121.1
Terminal effector memory CD8 T-cell nTPM: 132.4
Samples: 4
Max nTPM: 153.0
Min nTPM: 102.9
RHH5232_R3604
102.9
RHH5204_R3575
151.7
RHH5261_R3633
153.0
RHH5296_R3662
121.9
Vd2 gdTCR nTPM: 109.8
Samples: 4
Max nTPM: 125.6
Min nTPM: 97.9
RHH5234_R3606
97.9
RHH5206_R3577
125.6
RHH5263_R3635
111.7
RHH5298_R3664
103.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
