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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1836.0
nTPM
Monaco:
1336.7
nTPM
Schmiedel:
848.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1836.0
HPA sample
nTPM
gdT-cell nTPM: 741.3
Samples: 6
Max nTPM: 1049.3
Min nTPM: 574.2
P10809_1007
641.6
P10809_1022
753.8
P10809_1041
1049.3
P10809_1060
574.2
P10809_1077
628.6
P10809_1098
800.2
MAIT T-cell nTPM: 1363.5
Samples: 6
Max nTPM: 1666.3
Min nTPM: 947.5
P10809_1006
1047.8
P10809_1024
1401.7
P10809_1043
1631.6
P10809_1062
1485.8
P10809_1083
947.5
P10809_1097
1666.3
Memory CD4 T-cell nTPM: 1275.8
Samples: 6
Max nTPM: 1610.7
Min nTPM: 859.6
P10809_1014
1210.7
P10809_1026
1452.5
P10809_1045
1610.7
P10809_1064
1118.8
P10809_1086
859.6
P10809_1113
1402.7
Memory CD8 T-cell nTPM: 962.4
Samples: 5
Max nTPM: 1263.5
Min nTPM: 806.2
P10809_1012
871.4
P10809_1027
901.6
P10809_1046
1263.5
P10809_1065
806.2
P10809_1111
969.1
Naive CD4 T-cell nTPM: 1836.0
Samples: 6
Max nTPM: 2565.6
Min nTPM: 1359.9
P10809_1015
1533.0
P10809_1030
1960.9
P10809_1049
2565.6
P10809_1068
1869.7
P10809_1085
1359.9
P10809_1112
1726.8
Naive CD8 T-cell nTPM: 1439.9
Samples: 6
Max nTPM: 1922.1
Min nTPM: 633.8
P10809_1016
1922.1
P10809_1031
1546.8
P10809_1050
1515.1
P10809_1069
1368.3
P10809_1087
633.8
P10809_1110
1653.2
T-reg nTPM: 1131.9
Samples: 6
Max nTPM: 1581.5
Min nTPM: 793.3
P10809_1018
793.3
P10809_1037
1061.8
P10809_1056
1581.5
P10809_1075
1212.9
P10809_1094
1063.0
P10809_1106
1078.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1336.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 790.3
Samples: 4
Max nTPM: 1067.6
Min nTPM: 569.2
RHH5202_R3573
569.2
RHH5230_R3602
869.8
RHH5259_R3631
654.7
RHH5288_R3660
1067.6
Effector memory CD8 T-cell nTPM: 301.0
Samples: 4
Max nTPM: 369.5
Min nTPM: 196.2
RHH5203_R3574
338.9
RHH5231_R3603
299.3
RHH5260_R3632
369.5
RHH5289_R3661
196.2
MAIT T-cell nTPM: 770.9
Samples: 4
Max nTPM: 1168.6
Min nTPM: 567.7
RHH5233_R3605
567.7
RHH5205_R3576
645.0
RHH5262_R3634
702.3
RHH5297_R3663
1168.6
Memory CD4 T-cell TFH nTPM: 934.5
Samples: 4
Max nTPM: 1316.7
Min nTPM: 616.5
RHH5300_R3666
1316.7
RHH5236_R3608
1142.3
RHH5265_R3637
616.5
RHH5208_R3579
662.5
Memory CD4 T-cell Th1 nTPM: 1076.8
Samples: 4
Max nTPM: 1990.9
Min nTPM: 720.8
RHH5210_R3581
720.8
RHH5302_R3668
1990.9
RHH5238_R3610
842.9
RHH5267_R3639
752.4
Memory CD4 T-cell Th1/Th17 nTPM: 846.2
Samples: 4
Max nTPM: 1227.5
Min nTPM: 671.4
RHH5303_R3669
1227.5
RHH5211_R3582
671.4
RHH5239_R3611
715.6
RHH5268_R3640
770.3
Memory CD4 T-cell Th17 nTPM: 779.7
Samples: 4
Max nTPM: 1132.7
Min nTPM: 612.6
RHH5304_R3670
1132.7
RHH5212_R3583
755.4
RHH5240_R3612
612.6
RHH5269_R3641
617.9
Memory CD4 T-cell Th2 nTPM: 970.7
Samples: 4
Max nTPM: 1461.9
Min nTPM: 672.9
RHH5305_R3671
1461.9
RHH5213_R3584
783.4
RHH5241_R3613
964.7
RHH5270_R3642
672.9
Naive CD4 T-cell nTPM: 1336.7
Samples: 4
Max nTPM: 1973.8
Min nTPM: 827.2
RHH5306_R3672
1973.8
RHH5214_R3585
1693.7
RHH5242_R3614
827.2
RHH5271_R3643
852.2
Naive CD8 T-cell nTPM: 1101.8
Samples: 4
Max nTPM: 1266.6
Min nTPM: 801.5
RHH5201_R3572
801.5
RHH5229_R3601
1222.0
RHH5258_R3630
1117.1
RHH5287_R3659
1266.6
Non-Vd2 gdTCR nTPM: 504.7
Samples: 4
Max nTPM: 887.5
Min nTPM: 317.5
RHH5235_R3607
374.7
RHH5264_R3636
439.2
RHH5207_R3578
317.5
RHH5299_R3665
887.5
T-reg nTPM: 989.2
Samples: 4
Max nTPM: 1729.7
Min nTPM: 700.0
RHH5301_R3667
1729.7
RHH5237_R3609
720.5
RHH5266_R3638
700.0
RHH5209_R3580
806.7
Terminal effector memory CD4 T-cell nTPM: 408.0
Samples: 2
Max nTPM: 483.6
Min nTPM: 332.3
RHH5243_R3615
332.3
RHH5272_R3644
483.6
Terminal effector memory CD8 T-cell nTPM: 610.3
Samples: 4
Max nTPM: 1080.5
Min nTPM: 317.5
RHH5232_R3604
317.5
RHH5204_R3575
1080.5
RHH5261_R3633
439.0
RHH5296_R3662
604.2
Vd2 gdTCR nTPM: 963.5
Samples: 4
Max nTPM: 1611.4
Min nTPM: 575.6
RHH5234_R3606
575.6
RHH5206_R3577
1073.8
RHH5263_R3635
593.1
RHH5298_R3664
1611.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
