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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.9
nTPM
Monaco:
58.1
nTPM
Schmiedel:
39.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.9
HPA sample
nTPM
gdT-cell nTPM: 84.9
Samples: 6
Max nTPM: 121.6
Min nTPM: 47.5
P10809_1007
47.5
P10809_1022
89.3
P10809_1041
121.6
P10809_1060
70.0
P10809_1077
88.3
P10809_1098
92.7
MAIT T-cell nTPM: 84.1
Samples: 6
Max nTPM: 111.2
Min nTPM: 39.2
P10809_1006
39.2
P10809_1024
99.5
P10809_1043
111.2
P10809_1062
79.3
P10809_1083
86.9
P10809_1097
88.2
Memory CD4 T-cell nTPM: 90.8
Samples: 6
Max nTPM: 129.6
Min nTPM: 49.6
P10809_1014
49.6
P10809_1026
117.0
P10809_1045
129.6
P10809_1064
72.3
P10809_1086
87.2
P10809_1113
88.8
Memory CD8 T-cell nTPM: 84.6
Samples: 5
Max nTPM: 113.1
Min nTPM: 49.2
P10809_1012
49.2
P10809_1027
82.2
P10809_1046
113.1
P10809_1065
86.2
P10809_1111
92.5
Naive CD4 T-cell nTPM: 104.9
Samples: 6
Max nTPM: 198.3
Min nTPM: 44.1
P10809_1015
44.1
P10809_1030
111.3
P10809_1049
198.3
P10809_1068
79.7
P10809_1085
104.0
P10809_1112
92.0
Naive CD8 T-cell nTPM: 83.5
Samples: 6
Max nTPM: 112.4
Min nTPM: 48.7
P10809_1016
48.7
P10809_1031
85.8
P10809_1050
112.4
P10809_1069
89.6
P10809_1087
81.0
P10809_1110
83.6
T-reg nTPM: 102.6
Samples: 6
Max nTPM: 189.6
Min nTPM: 54.7
P10809_1018
54.7
P10809_1037
86.6
P10809_1056
189.6
P10809_1075
68.1
P10809_1094
117.3
P10809_1106
99.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
58.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.6
Samples: 4
Max nTPM: 47.7
Min nTPM: 30.0
RHH5202_R3573
35.6
RHH5230_R3602
30.0
RHH5259_R3631
32.9
RHH5288_R3660
47.7
Effector memory CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 53.0
Min nTPM: 35.0
RHH5203_R3574
35.4
RHH5231_R3603
53.0
RHH5260_R3632
35.0
RHH5289_R3661
40.0
MAIT T-cell nTPM: 43.2
Samples: 4
Max nTPM: 47.8
Min nTPM: 33.2
RHH5233_R3605
47.8
RHH5205_R3576
33.2
RHH5262_R3634
47.6
RHH5297_R3663
44.1
Memory CD4 T-cell TFH nTPM: 58.1
Samples: 4
Max nTPM: 79.5
Min nTPM: 45.7
RHH5300_R3666
45.7
RHH5236_R3608
79.5
RHH5265_R3637
48.2
RHH5208_R3579
58.9
Memory CD4 T-cell Th1 nTPM: 47.4
Samples: 4
Max nTPM: 63.8
Min nTPM: 36.8
RHH5210_R3581
47.4
RHH5302_R3668
63.8
RHH5238_R3610
36.8
RHH5267_R3639
41.7
Memory CD4 T-cell Th1/Th17 nTPM: 40.6
Samples: 4
Max nTPM: 54.0
Min nTPM: 26.2
RHH5303_R3669
54.0
RHH5211_R3582
42.0
RHH5239_R3611
26.2
RHH5268_R3640
40.1
Memory CD4 T-cell Th17 nTPM: 33.8
Samples: 4
Max nTPM: 44.7
Min nTPM: 24.1
RHH5304_R3670
36.0
RHH5212_R3583
44.7
RHH5240_R3612
30.3
RHH5269_R3641
24.1
Memory CD4 T-cell Th2 nTPM: 45.5
Samples: 4
Max nTPM: 57.3
Min nTPM: 37.4
RHH5305_R3671
37.4
RHH5213_R3584
57.3
RHH5241_R3613
45.2
RHH5270_R3642
41.9
Naive CD4 T-cell nTPM: 48.2
Samples: 4
Max nTPM: 63.0
Min nTPM: 35.5
RHH5306_R3672
63.0
RHH5214_R3585
58.6
RHH5242_R3614
35.6
RHH5271_R3643
35.5
Naive CD8 T-cell nTPM: 55.2
Samples: 4
Max nTPM: 65.4
Min nTPM: 34.2
RHH5201_R3572
56.0
RHH5229_R3601
34.2
RHH5258_R3630
65.4
RHH5287_R3659
65.3
Non-Vd2 gdTCR nTPM: 45.6
Samples: 4
Max nTPM: 57.1
Min nTPM: 35.2
RHH5235_R3607
35.2
RHH5264_R3636
46.3
RHH5207_R3578
43.8
RHH5299_R3665
57.1
T-reg nTPM: 47.2
Samples: 4
Max nTPM: 54.7
Min nTPM: 35.3
RHH5301_R3667
48.8
RHH5237_R3609
54.7
RHH5266_R3638
35.3
RHH5209_R3580
49.8
Terminal effector memory CD4 T-cell nTPM: 42.1
Samples: 2
Max nTPM: 54.8
Min nTPM: 29.4
RHH5243_R3615
29.4
RHH5272_R3644
54.8
Terminal effector memory CD8 T-cell nTPM: 42.1
Samples: 4
Max nTPM: 51.1
Min nTPM: 35.4
RHH5232_R3604
40.5
RHH5204_R3575
51.1
RHH5261_R3633
35.4
RHH5296_R3662
41.5
Vd2 gdTCR nTPM: 36.0
Samples: 4
Max nTPM: 49.7
Min nTPM: 23.2
RHH5234_R3606
34.4
RHH5206_R3577
36.5
RHH5263_R3635
23.2
RHH5298_R3664
49.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
