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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
722.0
nTPM
Monaco:
254.7
nTPM
Schmiedel:
82.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
722.0
HPA sample
nTPM
gdT-cell nTPM: 722.0
Samples: 6
Max nTPM: 933.4
Min nTPM: 441.1
P10809_1007
441.1
P10809_1022
933.4
P10809_1041
873.6
P10809_1060
579.5
P10809_1077
824.1
P10809_1098
680.0
MAIT T-cell nTPM: 272.5
Samples: 6
Max nTPM: 431.5
Min nTPM: 99.2
P10809_1006
99.2
P10809_1024
363.7
P10809_1043
260.1
P10809_1062
218.9
P10809_1083
261.5
P10809_1097
431.5
Memory CD4 T-cell nTPM: 323.4
Samples: 6
Max nTPM: 396.3
Min nTPM: 182.1
P10809_1014
182.1
P10809_1026
342.5
P10809_1045
347.7
P10809_1064
396.3
P10809_1086
387.7
P10809_1113
284.3
Memory CD8 T-cell nTPM: 597.9
Samples: 5
Max nTPM: 763.1
Min nTPM: 299.0
P10809_1012
299.0
P10809_1027
763.1
P10809_1046
724.2
P10809_1065
646.0
P10809_1111
557.2
Naive CD4 T-cell nTPM: 268.8
Samples: 6
Max nTPM: 387.0
Min nTPM: 141.3
P10809_1015
141.3
P10809_1030
275.1
P10809_1049
387.0
P10809_1068
264.8
P10809_1085
302.9
P10809_1112
241.5
Naive CD8 T-cell nTPM: 468.0
Samples: 6
Max nTPM: 659.5
Min nTPM: 215.2
P10809_1016
215.2
P10809_1031
443.6
P10809_1050
507.0
P10809_1069
595.9
P10809_1087
659.5
P10809_1110
386.6
T-reg nTPM: 364.4
Samples: 6
Max nTPM: 562.0
Min nTPM: 216.1
P10809_1018
216.1
P10809_1037
305.2
P10809_1056
562.0
P10809_1075
429.5
P10809_1094
293.1
P10809_1106
380.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
254.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 93.1
Samples: 4
Max nTPM: 114.1
Min nTPM: 73.1
RHH5202_R3573
73.1
RHH5230_R3602
91.2
RHH5259_R3631
93.9
RHH5288_R3660
114.1
Effector memory CD8 T-cell nTPM: 103.6
Samples: 4
Max nTPM: 127.5
Min nTPM: 69.8
RHH5203_R3574
92.7
RHH5231_R3603
124.5
RHH5260_R3632
127.5
RHH5289_R3661
69.8
MAIT T-cell nTPM: 60.1
Samples: 4
Max nTPM: 71.0
Min nTPM: 41.8
RHH5233_R3605
60.5
RHH5205_R3576
41.8
RHH5262_R3634
71.0
RHH5297_R3663
67.0
Memory CD4 T-cell TFH nTPM: 79.7
Samples: 4
Max nTPM: 113.5
Min nTPM: 55.6
RHH5300_R3666
86.9
RHH5236_R3608
113.5
RHH5265_R3637
62.9
RHH5208_R3579
55.6
Memory CD4 T-cell Th1 nTPM: 103.2
Samples: 4
Max nTPM: 161.6
Min nTPM: 41.6
RHH5210_R3581
41.6
RHH5302_R3668
161.6
RHH5238_R3610
115.3
RHH5267_R3639
94.2
Memory CD4 T-cell Th1/Th17 nTPM: 87.7
Samples: 4
Max nTPM: 108.6
Min nTPM: 52.5
RHH5303_R3669
108.6
RHH5211_R3582
81.4
RHH5239_R3611
52.5
RHH5268_R3640
108.4
Memory CD4 T-cell Th17 nTPM: 66.1
Samples: 4
Max nTPM: 81.6
Min nTPM: 46.1
RHH5304_R3670
81.6
RHH5212_R3583
73.4
RHH5240_R3612
46.1
RHH5269_R3641
63.4
Memory CD4 T-cell Th2 nTPM: 72.5
Samples: 4
Max nTPM: 93.1
Min nTPM: 61.0
RHH5305_R3671
93.1
RHH5213_R3584
66.8
RHH5241_R3613
61.0
RHH5270_R3642
69.1
Naive CD4 T-cell nTPM: 63.9
Samples: 4
Max nTPM: 95.1
Min nTPM: 42.8
RHH5306_R3672
58.0
RHH5214_R3585
95.1
RHH5242_R3614
42.8
RHH5271_R3643
59.8
Naive CD8 T-cell nTPM: 61.1
Samples: 4
Max nTPM: 70.5
Min nTPM: 53.6
RHH5201_R3572
56.5
RHH5229_R3601
53.6
RHH5258_R3630
70.5
RHH5287_R3659
63.6
Non-Vd2 gdTCR nTPM: 194.6
Samples: 4
Max nTPM: 345.2
Min nTPM: 126.2
RHH5235_R3607
126.2
RHH5264_R3636
176.7
RHH5207_R3578
130.2
RHH5299_R3665
345.2
T-reg nTPM: 78.1
Samples: 4
Max nTPM: 101.4
Min nTPM: 66.6
RHH5301_R3667
101.4
RHH5237_R3609
66.6
RHH5266_R3638
72.8
RHH5209_R3580
71.7
Terminal effector memory CD4 T-cell nTPM: 116.4
Samples: 2
Max nTPM: 124.3
Min nTPM: 108.4
RHH5243_R3615
124.3
RHH5272_R3644
108.4
Terminal effector memory CD8 T-cell nTPM: 254.7
Samples: 4
Max nTPM: 470.2
Min nTPM: 147.9
RHH5232_R3604
147.9
RHH5204_R3575
470.2
RHH5261_R3633
198.0
RHH5296_R3662
202.8
Vd2 gdTCR nTPM: 215.1
Samples: 4
Max nTPM: 346.5
Min nTPM: 109.6
RHH5234_R3606
109.6
RHH5206_R3577
346.5
RHH5263_R3635
148.4
RHH5298_R3664
256.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
