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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
299.0
nTPM
Monaco:
125.1
nTPM
Schmiedel:
104.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
299.0
HPA sample
nTPM
gdT-cell nTPM: 51.0
Samples: 6
Max nTPM: 75.2
Min nTPM: 37.5
P10809_1007
37.5
P10809_1022
62.2
P10809_1041
75.2
P10809_1060
43.7
P10809_1077
38.7
P10809_1098
48.7
MAIT T-cell nTPM: 64.9
Samples: 6
Max nTPM: 123.0
Min nTPM: 41.8
P10809_1006
41.8
P10809_1024
123.0
P10809_1043
59.9
P10809_1062
59.7
P10809_1083
53.4
P10809_1097
51.6
Memory CD4 T-cell nTPM: 105.2
Samples: 6
Max nTPM: 140.5
Min nTPM: 68.4
P10809_1014
76.2
P10809_1026
123.3
P10809_1045
140.5
P10809_1064
97.7
P10809_1086
68.4
P10809_1113
124.9
Memory CD8 T-cell nTPM: 56.6
Samples: 5
Max nTPM: 73.3
Min nTPM: 45.1
P10809_1012
45.1
P10809_1027
60.8
P10809_1046
73.3
P10809_1065
48.1
P10809_1111
55.8
Naive CD4 T-cell nTPM: 68.4
Samples: 6
Max nTPM: 104.4
Min nTPM: 52.5
P10809_1015
53.0
P10809_1030
76.2
P10809_1049
104.4
P10809_1068
67.9
P10809_1085
52.5
P10809_1112
56.2
Naive CD8 T-cell nTPM: 41.5
Samples: 6
Max nTPM: 54.5
Min nTPM: 29.7
P10809_1016
29.7
P10809_1031
54.5
P10809_1050
46.6
P10809_1069
49.8
P10809_1087
38.4
P10809_1110
29.9
T-reg nTPM: 299.0
Samples: 6
Max nTPM: 379.6
Min nTPM: 204.3
P10809_1018
204.3
P10809_1037
379.6
P10809_1056
340.5
P10809_1075
324.5
P10809_1094
210.8
P10809_1106
334.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
125.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 50.4
Samples: 4
Max nTPM: 73.5
Min nTPM: 20.4
RHH5202_R3573
39.4
RHH5230_R3602
68.2
RHH5259_R3631
20.4
RHH5288_R3660
73.5
Effector memory CD8 T-cell nTPM: 66.4
Samples: 4
Max nTPM: 100.5
Min nTPM: 30.4
RHH5203_R3574
74.6
RHH5231_R3603
60.2
RHH5260_R3632
30.4
RHH5289_R3661
100.5
MAIT T-cell nTPM: 40.6
Samples: 4
Max nTPM: 58.9
Min nTPM: 29.3
RHH5233_R3605
29.3
RHH5205_R3576
37.3
RHH5262_R3634
36.7
RHH5297_R3663
58.9
Memory CD4 T-cell TFH nTPM: 125.2
Samples: 4
Max nTPM: 157.5
Min nTPM: 84.0
RHH5300_R3666
157.5
RHH5236_R3608
106.7
RHH5265_R3637
84.0
RHH5208_R3579
152.5
Memory CD4 T-cell Th1 nTPM: 66.9
Samples: 4
Max nTPM: 99.3
Min nTPM: 51.4
RHH5210_R3581
51.4
RHH5302_R3668
99.3
RHH5238_R3610
52.8
RHH5267_R3639
64.1
Memory CD4 T-cell Th1/Th17 nTPM: 60.8
Samples: 4
Max nTPM: 92.3
Min nTPM: 42.6
RHH5303_R3669
92.3
RHH5211_R3582
62.6
RHH5239_R3611
42.6
RHH5268_R3640
45.5
Memory CD4 T-cell Th17 nTPM: 60.1
Samples: 4
Max nTPM: 85.0
Min nTPM: 40.6
RHH5304_R3670
85.0
RHH5212_R3583
57.0
RHH5240_R3612
57.9
RHH5269_R3641
40.6
Memory CD4 T-cell Th2 nTPM: 61.1
Samples: 4
Max nTPM: 82.5
Min nTPM: 41.1
RHH5305_R3671
82.5
RHH5213_R3584
59.5
RHH5241_R3613
61.3
RHH5270_R3642
41.1
Naive CD4 T-cell nTPM: 64.5
Samples: 4
Max nTPM: 81.2
Min nTPM: 51.0
RHH5306_R3672
81.2
RHH5214_R3585
73.2
RHH5242_R3614
51.0
RHH5271_R3643
52.5
Naive CD8 T-cell nTPM: 39.6
Samples: 4
Max nTPM: 52.8
Min nTPM: 25.2
RHH5201_R3572
52.8
RHH5229_R3601
25.2
RHH5258_R3630
30.6
RHH5287_R3659
49.9
Non-Vd2 gdTCR nTPM: 44.2
Samples: 4
Max nTPM: 59.8
Min nTPM: 32.1
RHH5235_R3607
50.4
RHH5264_R3636
34.6
RHH5207_R3578
59.8
RHH5299_R3665
32.1
T-reg nTPM: 100.0
Samples: 4
Max nTPM: 128.6
Min nTPM: 66.9
RHH5301_R3667
128.6
RHH5237_R3609
99.4
RHH5266_R3638
105.1
RHH5209_R3580
66.9
Terminal effector memory CD4 T-cell nTPM: 92.1
Samples: 2
Max nTPM: 94.4
Min nTPM: 89.8
RHH5243_R3615
89.8
RHH5272_R3644
94.4
Terminal effector memory CD8 T-cell nTPM: 51.2
Samples: 4
Max nTPM: 76.2
Min nTPM: 32.5
RHH5232_R3604
76.2
RHH5204_R3575
32.5
RHH5261_R3633
37.1
RHH5296_R3662
58.8
Vd2 gdTCR nTPM: 49.2
Samples: 4
Max nTPM: 72.7
Min nTPM: 37.1
RHH5234_R3606
37.7
RHH5206_R3577
72.7
RHH5263_R3635
37.1
RHH5298_R3664
49.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
