HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.2 nTPM
HPA Brain:72.8 nTPM
GTEx:33.2 nTPM
FANTOM5:47.5 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:36.1 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA028900Antibody CAB002508
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.8
Sample id Sample description nTPM
Hippocampus
nTPM: 64.2
2529 Female, age 94, left hemisphere 71.6
1855 Male, age 76, left hemisphere 64.3
1898 Male, age 80, left hemisphere 64.1
2148 Female, age 91, left hemisphere 63.9
2621 Female, age 67, right hemisphere 60.8
1911 Female, age 85, right hemisphere 60.3
Dentate gyrus
nTPM: 60.5
2530 Female, age 94, left hemisphere 97.4
2010 Male, age 76, both hemispheres 70.6
2246 Female, age 85, both hemispheres 55.0
2528 Male, age 74, both hemispheres 54.2
1927 Female, age 91, both hemispheres 44.4
2531 Female, age 67, both hemispheres 41.5
Entorhinal gyrus
nTPM: 62.8
2117 Female, age 91, right hemisphere 97.1
2764 Male, age 80, right hemisphere 76.3
2686 Male, age 75, right hemisphere 57.0
2613 Female, age 94, left hemisphere 54.1
1938 Female, age 85, left hemisphere 48.3
1787 Male, age 76, left hemisphere 43.9
Hippocampus, CA1
nTPM: 57.0
2082 Female, age 91, right hemisphere 66.8
2527 Male, age 74, both hemispheres 66.8
1873 Female, age 85, both hemispheres 60.2
2749 Male, age 80, left hemisphere 48.3
2045 Male, age 76, both hemispheres 42.9
Hippocampus, CA2
nTPM: 65.6
1963 Male, age 80, left hemisphere 88.1
2249 Male, age 74, both hemispheres 85.8
2113 Female, age 91, right hemisphere 66.8
2437 Female, age 94, left hemisphere 64.5
1940 Female, age 85, left hemisphere 54.8
1892 Male, age 76, both hemispheres 33.3
Hippocampus, CA3
nTPM: 51.6
2436 Male, age 74, both hemispheres 74.5
1891 Female, age 85, both hemispheres 69.5
2861 Female, age 67, both hemispheres 53.6
1867 Male, age 76, both hemispheres 45.8
2620 Female, age 94, left hemisphere 34.7
2137 Male, age 80, left hemisphere 31.5
Parahippocampal cortex
nTPM: 54.0
2692 Male, age 74, both hemispheres 79.8
1990 Female, age 91, right hemisphere 63.3
2018 Male, age 76, both hemispheres 61.6
1850 Male, age 80, both hemispheres 55.4
2250 Female, age 67, right hemisphere 51.8
1933 Female, age 85, both hemispheres 51.6
2532 Female, age 72, left hemisphere 50.9
2245 Female, age 91, both hemispheres 44.7
2622 Female, age 67, right hemisphere 43.7
2693 Female, age 94, both hemispheres 37.2
Perirhinal gyrus
nTPM: 36.1
1847 Female, age 91, left hemisphere 46.2
1794 Male, age 80, right hemisphere 35.8
2848 Male, age 76, right hemisphere 35.4
2521 Female, age 94, right hemisphere 32.0
1841 Female, age 85, right hemisphere 30.9
Subiculum
nTPM: 72.8
2042 Male, age 76, both hemispheres 83.9
1901 Male, age 80, both hemispheres 82.7
2729 Female, age 91, right hemisphere 72.1
2619 Male, age 74, both hemispheres 71.6
2438 Female, age 94, left hemisphere 67.8
1977 Female, age 85, both hemispheres 58.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.2
Samples: 197

Max nTPM: 90.7
Min nTPM: 7.7
Std nTPM: 13.2
Median nTPM: 30.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 90.7
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 77.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 73.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 66.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 65.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 63.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 61.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 60.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 60.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 56.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 56.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.5
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 36.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 12.1
Min nTPM: 6.9
Sample A Female 10.7
Sample B Female 6.9
Sample C Male 11.2
Sample D Male 12.1
Dorsal hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 7.9
Sample A Female 19.4
Sample B Female 11.0
Sample C Male 19.2
Sample D Male 7.9
Entorhinal cortex
nTPM: 11.2
Samples: 4

Max nTPM: 12.7
Min nTPM: 7.5
Sample A Female 12.5
Sample B Female 12.0
Sample C Male 12.7
Sample D Male 7.5
Ventral hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 18.8
Min nTPM: 8.2
Sample A Female 12.4
Sample B Female 8.2
Sample C Male 18.8
Sample D Male 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 12.5
Sample A Male 21.9
Sample B Male 15.6
Sample C Female 18.7
Sample D Female 12.5
Hippocampal formation
nTPM: 36.1
Samples: 4

Max nTPM: 51.1
Min nTPM: 21.8
Sample A Male 21.8
Sample B Male 27.8
Sample C Female 51.1
Sample D Female 43.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69735676 Antisense, RP_050503_03_C07, Mouse strain C57BL/6J (56 days, male) 0.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org