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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
172.7
nTPM
Monaco:
450.2
nTPM
Schmiedel:
321.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.7
HPA sample
nTPM
gdT-cell nTPM: 29.6
Samples: 6
Max nTPM: 43.8
Min nTPM: 15.1
P10809_1007
23.6
P10809_1022
43.8
P10809_1041
26.3
P10809_1060
28.0
P10809_1077
15.1
P10809_1098
40.5
MAIT T-cell nTPM: 51.1
Samples: 6
Max nTPM: 71.0
Min nTPM: 37.3
P10809_1006
37.3
P10809_1024
45.9
P10809_1043
48.5
P10809_1062
53.6
P10809_1083
71.0
P10809_1097
50.4
Memory CD4 T-cell nTPM: 150.4
Samples: 6
Max nTPM: 188.3
Min nTPM: 105.1
P10809_1014
164.4
P10809_1026
159.3
P10809_1045
188.3
P10809_1064
105.1
P10809_1086
106.7
P10809_1113
178.3
Memory CD8 T-cell nTPM: 69.7
Samples: 5
Max nTPM: 113.7
Min nTPM: 28.6
P10809_1012
113.7
P10809_1027
65.4
P10809_1046
48.9
P10809_1065
28.6
P10809_1111
91.8
Naive CD4 T-cell nTPM: 50.6
Samples: 6
Max nTPM: 58.4
Min nTPM: 40.0
P10809_1015
40.0
P10809_1030
57.1
P10809_1049
51.1
P10809_1068
56.0
P10809_1085
41.2
P10809_1112
58.4
Naive CD8 T-cell nTPM: 22.8
Samples: 6
Max nTPM: 32.2
Min nTPM: 16.7
P10809_1016
26.5
P10809_1031
21.1
P10809_1050
19.0
P10809_1069
21.2
P10809_1087
16.7
P10809_1110
32.2
T-reg nTPM: 172.7
Samples: 6
Max nTPM: 283.0
Min nTPM: 128.0
P10809_1018
158.6
P10809_1037
154.6
P10809_1056
283.0
P10809_1075
128.0
P10809_1094
164.1
P10809_1106
148.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
450.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 235.1
Samples: 4
Max nTPM: 320.3
Min nTPM: 157.7
RHH5202_R3573
157.7
RHH5230_R3602
320.3
RHH5259_R3631
170.9
RHH5288_R3660
291.4
Effector memory CD8 T-cell nTPM: 152.4
Samples: 4
Max nTPM: 183.4
Min nTPM: 123.1
RHH5203_R3574
129.6
RHH5231_R3603
183.4
RHH5260_R3632
123.1
RHH5289_R3661
173.4
MAIT T-cell nTPM: 101.4
Samples: 4
Max nTPM: 156.8
Min nTPM: 67.2
RHH5233_R3605
156.8
RHH5205_R3576
88.3
RHH5262_R3634
67.2
RHH5297_R3663
93.1
Memory CD4 T-cell TFH nTPM: 348.7
Samples: 4
Max nTPM: 563.3
Min nTPM: 244.3
RHH5300_R3666
300.9
RHH5236_R3608
563.3
RHH5265_R3637
286.4
RHH5208_R3579
244.3
Memory CD4 T-cell Th1 nTPM: 277.6
Samples: 4
Max nTPM: 321.2
Min nTPM: 187.2
RHH5210_R3581
187.2
RHH5302_R3668
303.3
RHH5238_R3610
321.2
RHH5267_R3639
298.7
Memory CD4 T-cell Th1/Th17 nTPM: 307.1
Samples: 4
Max nTPM: 360.8
Min nTPM: 237.0
RHH5303_R3669
360.8
RHH5211_R3582
335.6
RHH5239_R3611
237.0
RHH5268_R3640
294.8
Memory CD4 T-cell Th17 nTPM: 370.0
Samples: 4
Max nTPM: 551.0
Min nTPM: 299.2
RHH5304_R3670
299.2
RHH5212_R3583
330.0
RHH5240_R3612
551.0
RHH5269_R3641
299.6
Memory CD4 T-cell Th2 nTPM: 450.2
Samples: 4
Max nTPM: 524.4
Min nTPM: 401.4
RHH5305_R3671
439.0
RHH5213_R3584
436.1
RHH5241_R3613
524.4
RHH5270_R3642
401.4
Naive CD4 T-cell nTPM: 88.6
Samples: 4
Max nTPM: 125.2
Min nTPM: 63.8
RHH5306_R3672
90.4
RHH5214_R3585
75.0
RHH5242_R3614
125.2
RHH5271_R3643
63.8
Naive CD8 T-cell nTPM: 50.4
Samples: 4
Max nTPM: 78.6
Min nTPM: 39.0
RHH5201_R3572
78.6
RHH5229_R3601
39.0
RHH5258_R3630
44.0
RHH5287_R3659
40.0
Non-Vd2 gdTCR nTPM: 26.1
Samples: 4
Max nTPM: 59.7
Min nTPM: 12.5
RHH5235_R3607
59.7
RHH5264_R3636
15.2
RHH5207_R3578
12.5
RHH5299_R3665
17.0
T-reg nTPM: 237.1
Samples: 4
Max nTPM: 384.0
Min nTPM: 165.3
RHH5301_R3667
213.5
RHH5237_R3609
384.0
RHH5266_R3638
185.7
RHH5209_R3580
165.3
Terminal effector memory CD4 T-cell nTPM: 144.6
Samples: 2
Max nTPM: 167.5
Min nTPM: 121.7
RHH5243_R3615
167.5
RHH5272_R3644
121.7
Terminal effector memory CD8 T-cell nTPM: 55.6
Samples: 4
Max nTPM: 109.2
Min nTPM: 20.3
RHH5232_R3604
109.2
RHH5204_R3575
20.3
RHH5261_R3633
47.2
RHH5296_R3662
45.7
Vd2 gdTCR nTPM: 120.8
Samples: 4
Max nTPM: 190.0
Min nTPM: 68.3
RHH5234_R3606
190.0
RHH5206_R3577
68.3
RHH5263_R3635
112.4
RHH5298_R3664
112.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
