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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.1
nTPM
Monaco:
253.1
nTPM
Schmiedel:
57.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.1
HPA sample
nTPM
gdT-cell nTPM: 26.1
Samples: 6
Max nTPM: 36.0
Min nTPM: 15.9
P10809_1007
27.8
P10809_1022
26.3
P10809_1041
23.8
P10809_1060
36.0
P10809_1077
26.8
P10809_1098
15.9
MAIT T-cell nTPM: 25.2
Samples: 6
Max nTPM: 36.3
Min nTPM: 11.7
P10809_1006
22.2
P10809_1024
33.1
P10809_1043
18.8
P10809_1062
29.3
P10809_1083
36.3
P10809_1097
11.7
Memory CD4 T-cell nTPM: 24.1
Samples: 6
Max nTPM: 33.1
Min nTPM: 13.5
P10809_1014
13.5
P10809_1026
28.9
P10809_1045
22.4
P10809_1064
29.1
P10809_1086
33.1
P10809_1113
17.4
Memory CD8 T-cell nTPM: 20.9
Samples: 5
Max nTPM: 31.1
Min nTPM: 7.5
P10809_1012
7.5
P10809_1027
31.1
P10809_1046
16.1
P10809_1065
30.5
P10809_1111
19.5
Naive CD4 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 31.9
Min nTPM: 17.8
P10809_1015
25.7
P10809_1030
24.0
P10809_1049
29.9
P10809_1068
31.9
P10809_1085
17.8
P10809_1112
18.9
Naive CD8 T-cell nTPM: 20.2
Samples: 6
Max nTPM: 28.1
Min nTPM: 11.8
P10809_1016
22.3
P10809_1031
12.8
P10809_1050
18.0
P10809_1069
28.1
P10809_1087
28.1
P10809_1110
11.8
T-reg nTPM: 22.3
Samples: 6
Max nTPM: 32.8
Min nTPM: 9.9
P10809_1018
9.9
P10809_1037
24.7
P10809_1056
21.2
P10809_1075
32.8
P10809_1094
22.7
P10809_1106
22.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
253.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 240.7
Samples: 4
Max nTPM: 280.7
Min nTPM: 205.7
RHH5202_R3573
228.6
RHH5230_R3602
280.7
RHH5259_R3631
205.7
RHH5288_R3660
247.9
Effector memory CD8 T-cell nTPM: 239.6
Samples: 4
Max nTPM: 287.2
Min nTPM: 187.7
RHH5203_R3574
281.9
RHH5231_R3603
201.4
RHH5260_R3632
187.7
RHH5289_R3661
287.2
MAIT T-cell nTPM: 213.6
Samples: 4
Max nTPM: 277.6
Min nTPM: 174.4
RHH5233_R3605
277.6
RHH5205_R3576
224.0
RHH5262_R3634
174.4
RHH5297_R3663
178.3
Memory CD4 T-cell TFH nTPM: 228.7
Samples: 4
Max nTPM: 267.2
Min nTPM: 194.5
RHH5300_R3666
209.7
RHH5236_R3608
194.5
RHH5265_R3637
267.2
RHH5208_R3579
243.4
Memory CD4 T-cell Th1 nTPM: 238.5
Samples: 4
Max nTPM: 286.9
Min nTPM: 194.5
RHH5210_R3581
286.9
RHH5302_R3668
219.4
RHH5238_R3610
253.2
RHH5267_R3639
194.5
Memory CD4 T-cell Th1/Th17 nTPM: 196.6
Samples: 4
Max nTPM: 260.9
Min nTPM: 146.7
RHH5303_R3669
184.5
RHH5211_R3582
146.7
RHH5239_R3611
260.9
RHH5268_R3640
194.2
Memory CD4 T-cell Th17 nTPM: 187.4
Samples: 4
Max nTPM: 205.4
Min nTPM: 170.3
RHH5304_R3670
202.5
RHH5212_R3583
170.3
RHH5240_R3612
171.2
RHH5269_R3641
205.4
Memory CD4 T-cell Th2 nTPM: 219.5
Samples: 4
Max nTPM: 287.6
Min nTPM: 182.9
RHH5305_R3671
182.9
RHH5213_R3584
216.2
RHH5241_R3613
287.6
RHH5270_R3642
191.1
Naive CD4 T-cell nTPM: 207.2
Samples: 4
Max nTPM: 302.0
Min nTPM: 163.2
RHH5306_R3672
196.6
RHH5214_R3585
163.2
RHH5242_R3614
302.0
RHH5271_R3643
166.8
Naive CD8 T-cell nTPM: 211.9
Samples: 4
Max nTPM: 276.7
Min nTPM: 174.9
RHH5201_R3572
276.7
RHH5229_R3601
174.9
RHH5258_R3630
202.9
RHH5287_R3659
193.1
Non-Vd2 gdTCR nTPM: 200.5
Samples: 4
Max nTPM: 254.5
Min nTPM: 158.2
RHH5235_R3607
225.2
RHH5264_R3636
158.2
RHH5207_R3578
254.5
RHH5299_R3665
163.9
T-reg nTPM: 205.7
Samples: 4
Max nTPM: 226.2
Min nTPM: 182.4
RHH5301_R3667
182.4
RHH5237_R3609
226.2
RHH5266_R3638
193.7
RHH5209_R3580
220.5
Terminal effector memory CD4 T-cell nTPM: 253.2
Samples: 2
Max nTPM: 255.2
Min nTPM: 251.1
RHH5243_R3615
255.2
RHH5272_R3644
251.1
Terminal effector memory CD8 T-cell nTPM: 183.0
Samples: 4
Max nTPM: 199.2
Min nTPM: 142.3
RHH5232_R3604
197.9
RHH5204_R3575
199.2
RHH5261_R3633
142.3
RHH5296_R3662
192.4
Vd2 gdTCR nTPM: 190.3
Samples: 4
Max nTPM: 231.8
Min nTPM: 157.7
RHH5234_R3606
231.8
RHH5206_R3577
173.4
RHH5263_R3635
157.7
RHH5298_R3664
198.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
