We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.2
nTPM
Monaco:
25.6
nTPM
Schmiedel:
128.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.2
HPA sample
nTPM
gdT-cell nTPM: 19.0
Samples: 6
Max nTPM: 25.5
Min nTPM: 13.1
P10809_1007
15.4
P10809_1022
13.1
P10809_1041
13.4
P10809_1060
25.5
P10809_1077
25.1
P10809_1098
21.4
MAIT T-cell nTPM: 20.4
Samples: 6
Max nTPM: 28.1
Min nTPM: 14.2
P10809_1006
14.3
P10809_1024
18.7
P10809_1043
14.2
P10809_1062
28.1
P10809_1083
25.4
P10809_1097
21.5
Memory CD4 T-cell nTPM: 22.6
Samples: 6
Max nTPM: 32.5
Min nTPM: 17.4
P10809_1014
18.5
P10809_1026
17.4
P10809_1045
18.7
P10809_1064
25.2
P10809_1086
32.5
P10809_1113
23.1
Memory CD8 T-cell nTPM: 24.5
Samples: 5
Max nTPM: 31.0
Min nTPM: 17.9
P10809_1012
17.9
P10809_1027
31.0
P10809_1046
19.0
P10809_1065
27.3
P10809_1111
27.3
Naive CD4 T-cell nTPM: 24.4
Samples: 6
Max nTPM: 29.7
Min nTPM: 20.4
P10809_1015
20.4
P10809_1030
25.4
P10809_1049
22.5
P10809_1068
23.3
P10809_1085
29.7
P10809_1112
24.9
Naive CD8 T-cell nTPM: 26.2
Samples: 6
Max nTPM: 33.1
Min nTPM: 15.9
P10809_1016
15.9
P10809_1031
25.3
P10809_1050
24.6
P10809_1069
30.2
P10809_1087
28.1
P10809_1110
33.1
T-reg nTPM: 25.1
Samples: 6
Max nTPM: 33.8
Min nTPM: 17.0
P10809_1018
17.0
P10809_1037
30.2
P10809_1056
19.7
P10809_1075
30.0
P10809_1094
20.0
P10809_1106
33.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 16.4
Samples: 4
Max nTPM: 27.5
Min nTPM: 10.7
RHH5202_R3573
15.8
RHH5230_R3602
10.7
RHH5259_R3631
11.5
RHH5288_R3660
27.5
Effector memory CD8 T-cell nTPM: 12.6
Samples: 4
Max nTPM: 15.0
Min nTPM: 8.4
RHH5203_R3574
8.4
RHH5231_R3603
13.4
RHH5260_R3632
13.7
RHH5289_R3661
15.0
MAIT T-cell nTPM: 18.2
Samples: 4
Max nTPM: 33.1
Min nTPM: 9.2
RHH5233_R3605
9.2
RHH5205_R3576
11.1
RHH5262_R3634
19.3
RHH5297_R3663
33.1
Memory CD4 T-cell TFH nTPM: 22.6
Samples: 4
Max nTPM: 47.7
Min nTPM: 10.3
RHH5300_R3666
10.3
RHH5236_R3608
47.7
RHH5265_R3637
16.8
RHH5208_R3579
15.4
Memory CD4 T-cell Th1 nTPM: 15.4
Samples: 4
Max nTPM: 19.1
Min nTPM: 8.9
RHH5210_R3581
18.9
RHH5302_R3668
19.1
RHH5238_R3610
8.9
RHH5267_R3639
14.5
Memory CD4 T-cell Th1/Th17 nTPM: 14.7
Samples: 4
Max nTPM: 25.8
Min nTPM: 9.5
RHH5303_R3669
25.8
RHH5211_R3582
11.6
RHH5239_R3611
9.5
RHH5268_R3640
11.9
Memory CD4 T-cell Th17 nTPM: 16.8
Samples: 4
Max nTPM: 25.3
Min nTPM: 9.7
RHH5304_R3670
12.3
RHH5212_R3583
25.3
RHH5240_R3612
9.7
RHH5269_R3641
19.8
Memory CD4 T-cell Th2 nTPM: 19.4
Samples: 4
Max nTPM: 25.7
Min nTPM: 13.5
RHH5305_R3671
25.7
RHH5213_R3584
22.5
RHH5241_R3613
13.5
RHH5270_R3642
15.9
Naive CD4 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 28.5
Min nTPM: 11.5
RHH5306_R3672
28.5
RHH5214_R3585
20.4
RHH5242_R3614
17.6
RHH5271_R3643
11.5
Naive CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 18.5
Min nTPM: 10.7
RHH5201_R3572
18.5
RHH5229_R3601
12.5
RHH5258_R3630
10.7
RHH5287_R3659
13.4
Non-Vd2 gdTCR nTPM: 18.7
Samples: 4
Max nTPM: 33.4
Min nTPM: 8.7
RHH5235_R3607
8.7
RHH5264_R3636
18.0
RHH5207_R3578
14.6
RHH5299_R3665
33.4
T-reg nTPM: 21.8
Samples: 4
Max nTPM: 26.9
Min nTPM: 18.6
RHH5301_R3667
19.6
RHH5237_R3609
26.9
RHH5266_R3638
18.6
RHH5209_R3580
22.1
Terminal effector memory CD4 T-cell nTPM: 13.9
Samples: 2
Max nTPM: 21.5
Min nTPM: 6.3
RHH5243_R3615
6.3
RHH5272_R3644
21.5
Terminal effector memory CD8 T-cell nTPM: 21.0
Samples: 4
Max nTPM: 29.8
Min nTPM: 11.7
RHH5232_R3604
11.7
RHH5204_R3575
29.8
RHH5261_R3633
24.7
RHH5296_R3662
17.6
Vd2 gdTCR nTPM: 25.6
Samples: 4
Max nTPM: 49.4
Min nTPM: 12.5
RHH5234_R3606
12.8
RHH5206_R3577
49.4
RHH5263_R3635
12.5
RHH5298_R3664
27.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
