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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.2
nTPM
Monaco:
121.0
nTPM
Schmiedel:
85.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.2
HPA sample
nTPM
gdT-cell nTPM: 11.1
Samples: 6
Max nTPM: 14.1
Min nTPM: 8.5
P10809_1007
8.5
P10809_1022
9.3
P10809_1041
11.4
P10809_1060
11.6
P10809_1077
14.1
P10809_1098
11.5
MAIT T-cell nTPM: 27.2
Samples: 6
Max nTPM: 34.2
Min nTPM: 20.4
P10809_1006
33.1
P10809_1024
34.2
P10809_1043
20.4
P10809_1062
24.7
P10809_1083
29.2
P10809_1097
21.8
Memory CD4 T-cell nTPM: 2.7
Samples: 6
Max nTPM: 5.4
Min nTPM: 1.0
P10809_1014
3.2
P10809_1026
1.0
P10809_1045
1.9
P10809_1064
1.4
P10809_1086
5.4
P10809_1113
3.3
Memory CD8 T-cell nTPM: 6.8
Samples: 5
Max nTPM: 8.3
Min nTPM: 5.4
P10809_1012
7.6
P10809_1027
5.6
P10809_1046
8.3
P10809_1065
7.1
P10809_1111
5.4
Naive CD4 T-cell nTPM: 1.7
Samples: 6
Max nTPM: 3.2
Min nTPM: 0.8
P10809_1015
1.6
P10809_1030
1.8
P10809_1049
1.1
P10809_1068
0.8
P10809_1085
3.2
P10809_1112
1.7
Naive CD8 T-cell nTPM: 6.7
Samples: 6
Max nTPM: 10.3
Min nTPM: 4.0
P10809_1016
6.5
P10809_1031
4.0
P10809_1050
8.1
P10809_1069
5.2
P10809_1087
10.3
P10809_1110
5.9
T-reg nTPM: 0.0
Samples: 6
Max nTPM: 0.0
Min nTPM: 0.0
P10809_1018
0.0
P10809_1037
0.0
P10809_1056
0.0
P10809_1075
0.0
P10809_1094
0.0
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
121.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 34.3
Samples: 4
Max nTPM: 58.9
Min nTPM: 15.6
RHH5202_R3573
35.9
RHH5230_R3602
58.9
RHH5259_R3631
26.7
RHH5288_R3660
15.6
Effector memory CD8 T-cell nTPM: 21.3
Samples: 4
Max nTPM: 32.9
Min nTPM: 15.9
RHH5203_R3574
32.9
RHH5231_R3603
17.3
RHH5260_R3632
18.9
RHH5289_R3661
15.9
MAIT T-cell nTPM: 121.0
Samples: 4
Max nTPM: 147.4
Min nTPM: 99.2
RHH5233_R3605
147.4
RHH5205_R3576
130.1
RHH5262_R3634
107.4
RHH5297_R3663
99.2
Memory CD4 T-cell TFH nTPM: 4.6
Samples: 4
Max nTPM: 6.7
Min nTPM: 2.8
RHH5300_R3666
3.5
RHH5236_R3608
6.7
RHH5265_R3637
5.5
RHH5208_R3579
2.8
Memory CD4 T-cell Th1 nTPM: 10.0
Samples: 4
Max nTPM: 17.2
Min nTPM: 5.0
RHH5210_R3581
11.3
RHH5302_R3668
6.4
RHH5238_R3610
17.2
RHH5267_R3639
5.0
Memory CD4 T-cell Th1/Th17 nTPM: 48.9
Samples: 4
Max nTPM: 61.5
Min nTPM: 28.7
RHH5303_R3669
51.4
RHH5211_R3582
61.5
RHH5239_R3611
53.9
RHH5268_R3640
28.7
Memory CD4 T-cell Th17 nTPM: 32.7
Samples: 4
Max nTPM: 50.5
Min nTPM: 26.1
RHH5304_R3670
50.5
RHH5212_R3583
26.1
RHH5240_R3612
26.8
RHH5269_R3641
27.4
Memory CD4 T-cell Th2 nTPM: 3.6
Samples: 4
Max nTPM: 4.9
Min nTPM: 0.8
RHH5305_R3671
4.9
RHH5213_R3584
4.8
RHH5241_R3613
0.8
RHH5270_R3642
3.8
Naive CD4 T-cell nTPM: 6.7
Samples: 4
Max nTPM: 8.3
Min nTPM: 5.6
RHH5306_R3672
5.6
RHH5214_R3585
8.3
RHH5242_R3614
6.1
RHH5271_R3643
6.8
Naive CD8 T-cell nTPM: 36.8
Samples: 4
Max nTPM: 55.9
Min nTPM: 27.7
RHH5201_R3572
28.4
RHH5229_R3601
55.9
RHH5258_R3630
35.3
RHH5287_R3659
27.7
Non-Vd2 gdTCR nTPM: 61.8
Samples: 4
Max nTPM: 79.4
Min nTPM: 39.6
RHH5235_R3607
79.4
RHH5264_R3636
68.9
RHH5207_R3578
39.6
RHH5299_R3665
59.4
T-reg nTPM: 1.9
Samples: 4
Max nTPM: 4.4
Min nTPM: 1.0
RHH5301_R3667
1.2
RHH5237_R3609
1.0
RHH5266_R3638
1.1
RHH5209_R3580
4.4
Terminal effector memory CD4 T-cell nTPM: 13.0
Samples: 2
Max nTPM: 22.8
Min nTPM: 3.1
RHH5243_R3615
3.1
RHH5272_R3644
22.8
Terminal effector memory CD8 T-cell nTPM: 43.8
Samples: 4
Max nTPM: 74.8
Min nTPM: 20.2
RHH5232_R3604
74.8
RHH5204_R3575
32.2
RHH5261_R3633
48.0
RHH5296_R3662
20.2
Vd2 gdTCR nTPM: 69.6
Samples: 4
Max nTPM: 95.5
Min nTPM: 46.8
RHH5234_R3606
95.5
RHH5206_R3577
46.8
RHH5263_R3635
80.1
RHH5298_R3664
56.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
