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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
163.4
nTPM
Monaco:
156.6
nTPM
Schmiedel:
80.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
163.4
HPA sample
nTPM
gdT-cell nTPM: 147.9
Samples: 6
Max nTPM: 185.8
Min nTPM: 110.2
P10809_1007
110.2
P10809_1022
185.8
P10809_1041
171.0
P10809_1060
125.8
P10809_1077
136.8
P10809_1098
157.7
MAIT T-cell nTPM: 135.4
Samples: 6
Max nTPM: 173.7
Min nTPM: 72.5
P10809_1006
72.5
P10809_1024
167.1
P10809_1043
146.9
P10809_1062
133.5
P10809_1083
118.8
P10809_1097
173.7
Memory CD4 T-cell nTPM: 125.0
Samples: 6
Max nTPM: 151.6
Min nTPM: 97.0
P10809_1014
97.0
P10809_1026
126.3
P10809_1045
151.6
P10809_1064
133.3
P10809_1086
119.3
P10809_1113
122.4
Memory CD8 T-cell nTPM: 144.5
Samples: 5
Max nTPM: 174.4
Min nTPM: 103.1
P10809_1012
103.1
P10809_1027
152.6
P10809_1046
174.4
P10809_1065
141.2
P10809_1111
151.3
Naive CD4 T-cell nTPM: 163.4
Samples: 6
Max nTPM: 244.7
Min nTPM: 108.3
P10809_1015
108.3
P10809_1030
169.8
P10809_1049
244.7
P10809_1068
166.3
P10809_1085
141.5
P10809_1112
149.8
Naive CD8 T-cell nTPM: 157.1
Samples: 6
Max nTPM: 188.8
Min nTPM: 119.7
P10809_1016
119.7
P10809_1031
185.3
P10809_1050
171.3
P10809_1069
188.8
P10809_1087
143.4
P10809_1110
134.3
T-reg nTPM: 95.2
Samples: 6
Max nTPM: 103.9
Min nTPM: 67.8
P10809_1018
67.8
P10809_1037
102.1
P10809_1056
103.9
P10809_1075
94.6
P10809_1094
101.0
P10809_1106
101.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
156.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 102.8
Samples: 4
Max nTPM: 132.2
Min nTPM: 61.0
RHH5202_R3573
132.2
RHH5230_R3602
94.7
RHH5259_R3631
61.0
RHH5288_R3660
123.3
Effector memory CD8 T-cell nTPM: 156.6
Samples: 4
Max nTPM: 208.9
Min nTPM: 84.2
RHH5203_R3574
191.6
RHH5231_R3603
208.9
RHH5260_R3632
84.2
RHH5289_R3661
141.8
MAIT T-cell nTPM: 109.9
Samples: 4
Max nTPM: 142.8
Min nTPM: 70.5
RHH5233_R3605
142.8
RHH5205_R3576
70.5
RHH5262_R3634
122.8
RHH5297_R3663
103.5
Memory CD4 T-cell TFH nTPM: 115.0
Samples: 4
Max nTPM: 135.7
Min nTPM: 101.6
RHH5300_R3666
101.6
RHH5236_R3608
135.7
RHH5265_R3637
102.3
RHH5208_R3579
120.4
Memory CD4 T-cell Th1 nTPM: 97.5
Samples: 4
Max nTPM: 129.3
Min nTPM: 74.5
RHH5210_R3581
94.4
RHH5302_R3668
129.3
RHH5238_R3610
74.5
RHH5267_R3639
91.9
Memory CD4 T-cell Th1/Th17 nTPM: 94.4
Samples: 4
Max nTPM: 137.4
Min nTPM: 47.6
RHH5303_R3669
137.4
RHH5211_R3582
120.4
RHH5239_R3611
47.6
RHH5268_R3640
72.2
Memory CD4 T-cell Th17 nTPM: 73.4
Samples: 4
Max nTPM: 87.2
Min nTPM: 58.6
RHH5304_R3670
82.3
RHH5212_R3583
87.2
RHH5240_R3612
65.3
RHH5269_R3641
58.6
Memory CD4 T-cell Th2 nTPM: 116.2
Samples: 4
Max nTPM: 127.8
Min nTPM: 100.9
RHH5305_R3671
118.6
RHH5213_R3584
117.4
RHH5241_R3613
127.8
RHH5270_R3642
100.9
Naive CD4 T-cell nTPM: 115.7
Samples: 4
Max nTPM: 125.2
Min nTPM: 99.8
RHH5306_R3672
118.7
RHH5214_R3585
118.9
RHH5242_R3614
125.2
RHH5271_R3643
99.8
Naive CD8 T-cell nTPM: 106.0
Samples: 4
Max nTPM: 171.1
Min nTPM: 45.3
RHH5201_R3572
171.1
RHH5229_R3601
45.3
RHH5258_R3630
117.6
RHH5287_R3659
90.1
Non-Vd2 gdTCR nTPM: 146.1
Samples: 4
Max nTPM: 196.0
Min nTPM: 95.6
RHH5235_R3607
95.6
RHH5264_R3636
196.0
RHH5207_R3578
154.1
RHH5299_R3665
138.6
T-reg nTPM: 85.0
Samples: 4
Max nTPM: 106.6
Min nTPM: 67.3
RHH5301_R3667
84.6
RHH5237_R3609
106.6
RHH5266_R3638
67.3
RHH5209_R3580
81.3
Terminal effector memory CD4 T-cell nTPM: 137.2
Samples: 2
Max nTPM: 167.8
Min nTPM: 106.5
RHH5243_R3615
106.5
RHH5272_R3644
167.8
Terminal effector memory CD8 T-cell nTPM: 152.2
Samples: 4
Max nTPM: 180.4
Min nTPM: 99.5
RHH5232_R3604
161.1
RHH5204_R3575
167.9
RHH5261_R3633
99.5
RHH5296_R3662
180.4
Vd2 gdTCR nTPM: 133.4
Samples: 4
Max nTPM: 177.4
Min nTPM: 104.2
RHH5234_R3606
122.7
RHH5206_R3577
177.4
RHH5263_R3635
104.2
RHH5298_R3664
129.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
