HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:98.3 nTPM
HPA Brain:120.3 nTPM
GTEx:98.3 nTPM
FANTOM5:381.8 Scaled Tags Per Million
Pig:262.2 nTPM
Mouse:256.3 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001306Antibody CAB033665
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 120.3
Sample id Sample description nTPM
Hippocampus
nTPM: 97.8
1898 Male, age 80, left hemisphere 129.2
2529 Female, age 94, left hemisphere 108.3
1855 Male, age 76, left hemisphere 104.2
2621 Female, age 67, right hemisphere 87.9
1911 Female, age 85, right hemisphere 80.5
2148 Female, age 91, left hemisphere 77.0
Dentate gyrus
nTPM: 96.6
2010 Male, age 76, both hemispheres 128.6
2530 Female, age 94, left hemisphere 97.3
1927 Female, age 91, both hemispheres 96.3
2246 Female, age 85, both hemispheres 96.2
2528 Male, age 74, both hemispheres 88.7
2531 Female, age 67, both hemispheres 72.5
Entorhinal gyrus
nTPM: 89.4
1938 Female, age 85, left hemisphere 117.8
2764 Male, age 80, right hemisphere 103.4
1787 Male, age 76, left hemisphere 95.4
2117 Female, age 91, right hemisphere 85.2
2686 Male, age 75, right hemisphere 75.2
2613 Female, age 94, left hemisphere 59.1
Hippocampus, CA1
nTPM: 120.3
2045 Male, age 76, both hemispheres 157.3
2749 Male, age 80, left hemisphere 151.4
1873 Female, age 85, both hemispheres 116.3
2527 Male, age 74, both hemispheres 99.3
2082 Female, age 91, right hemisphere 76.9
Hippocampus, CA2
nTPM: 108.5
1892 Male, age 76, both hemispheres 177.0
1963 Male, age 80, left hemisphere 109.9
2249 Male, age 74, both hemispheres 103.7
1940 Female, age 85, left hemisphere 94.0
2437 Female, age 94, left hemisphere 87.9
2113 Female, age 91, right hemisphere 78.5
Hippocampus, CA3
nTPM: 104.7
1867 Male, age 76, both hemispheres 159.2
2137 Male, age 80, left hemisphere 121.9
2436 Male, age 74, both hemispheres 100.3
1891 Female, age 85, both hemispheres 94.8
2861 Female, age 67, both hemispheres 76.6
2620 Female, age 94, left hemisphere 75.3
Parahippocampal cortex
nTPM: 97.4
1850 Male, age 80, both hemispheres 128.1
1933 Female, age 85, both hemispheres 119.7
2018 Male, age 76, both hemispheres 101.9
2245 Female, age 91, both hemispheres 100.8
2250 Female, age 67, right hemisphere 99.1
1990 Female, age 91, right hemisphere 98.4
2532 Female, age 72, left hemisphere 97.7
2692 Male, age 74, both hemispheres 81.4
2693 Female, age 94, both hemispheres 74.5
2622 Female, age 67, right hemisphere 71.9
Perirhinal gyrus
nTPM: 116.9
2848 Male, age 76, right hemisphere 133.2
1841 Female, age 85, right hemisphere 130.2
1847 Female, age 91, left hemisphere 124.8
1794 Male, age 80, right hemisphere 114.3
2521 Female, age 94, right hemisphere 82.1
Subiculum
nTPM: 98.9
2042 Male, age 76, both hemispheres 127.6
1901 Male, age 80, both hemispheres 114.4
1977 Female, age 85, both hemispheres 112.9
2438 Female, age 94, left hemisphere 91.7
2619 Male, age 74, both hemispheres 77.1
2729 Female, age 91, right hemisphere 69.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 98.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 98.3
Samples: 197

Max nTPM: 650.3
Min nTPM: 46.3
Std nTPM: 58.7
Median nTPM: 86.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 650.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 382.2
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 344.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 261.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 228.0
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 226.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 209.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 195.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 180.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 180.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 165.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 381.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 381.8
FF:10169-103B7 60 years, female 394.6
FF:10153-102I9 76 years, female 369.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 262.2
Pig sample Sample description nTPM
Subiculum
nTPM: 238.3
Samples: 4

Max nTPM: 293.2
Min nTPM: 199.3
Sample A Female 293.2
Sample B Female 210.6
Sample C Male 199.3
Sample D Male 250.0
Dorsal hippocampus
nTPM: 262.2
Samples: 4

Max nTPM: 331.5
Min nTPM: 227.6
Sample A Female 331.5
Sample B Female 261.7
Sample C Male 228.1
Sample D Male 227.6
Entorhinal cortex
nTPM: 250.6
Samples: 4

Max nTPM: 275.1
Min nTPM: 223.5
Sample A Female 275.1
Sample B Female 264.4
Sample C Male 239.4
Sample D Male 223.5
Ventral hippocampus
nTPM: 223.9
Samples: 4

Max nTPM: 265.6
Min nTPM: 181.8
Sample A Female 265.6
Sample B Female 181.8
Sample C Male 189.6
Sample D Male 258.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 256.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 247.4
Samples: 4

Max nTPM: 268.9
Min nTPM: 213.9
Sample A Male 213.9
Sample B Male 259.3
Sample C Female 247.6
Sample D Female 268.9
Hippocampal formation
nTPM: 256.3
Samples: 4

Max nTPM: 273.9
Min nTPM: 241.7
Sample A Male 260.5
Sample B Male 241.7
Sample C Female 273.9
Sample D Female 249.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
70528611 Antisense, RP_050623_03_A02, Mouse strain C57BL/6J (56 days, male) 3.4

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