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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
119.9
nTPM
Monaco:
262.0
nTPM
Schmiedel:
871.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.9
HPA sample
nTPM
gdT-cell nTPM: 93.5
Samples: 6
Max nTPM: 116.9
Min nTPM: 62.6
P10809_1007
73.8
P10809_1022
116.9
P10809_1041
62.6
P10809_1060
115.5
P10809_1077
115.6
P10809_1098
76.8
MAIT T-cell nTPM: 111.3
Samples: 6
Max nTPM: 147.7
Min nTPM: 62.0
P10809_1006
95.5
P10809_1024
140.5
P10809_1043
62.0
P10809_1062
147.7
P10809_1083
126.4
P10809_1097
95.8
Memory CD4 T-cell nTPM: 117.2
Samples: 6
Max nTPM: 150.9
Min nTPM: 94.8
P10809_1014
107.9
P10809_1026
119.6
P10809_1045
94.8
P10809_1064
127.1
P10809_1086
150.9
P10809_1113
102.6
Memory CD8 T-cell nTPM: 105.7
Samples: 5
Max nTPM: 128.1
Min nTPM: 77.9
P10809_1012
99.9
P10809_1027
114.2
P10809_1046
77.9
P10809_1065
128.1
P10809_1111
108.2
Naive CD4 T-cell nTPM: 119.9
Samples: 6
Max nTPM: 156.6
Min nTPM: 88.0
P10809_1015
109.2
P10809_1030
119.3
P10809_1049
88.0
P10809_1068
156.6
P10809_1085
137.7
P10809_1112
108.5
Naive CD8 T-cell nTPM: 113.8
Samples: 6
Max nTPM: 144.2
Min nTPM: 77.4
P10809_1016
98.7
P10809_1031
106.7
P10809_1050
77.4
P10809_1069
144.2
P10809_1087
138.3
P10809_1110
117.2
T-reg nTPM: 110.8
Samples: 6
Max nTPM: 139.2
Min nTPM: 78.8
P10809_1018
87.3
P10809_1037
122.0
P10809_1056
78.8
P10809_1075
139.2
P10809_1094
130.4
P10809_1106
106.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
262.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 208.6
Samples: 4
Max nTPM: 280.6
Min nTPM: 116.6
RHH5202_R3573
280.6
RHH5230_R3602
116.6
RHH5259_R3631
210.6
RHH5288_R3660
226.6
Effector memory CD8 T-cell nTPM: 255.4
Samples: 4
Max nTPM: 391.5
Min nTPM: 144.3
RHH5203_R3574
391.5
RHH5231_R3603
144.3
RHH5260_R3632
248.6
RHH5289_R3661
237.1
MAIT T-cell nTPM: 262.1
Samples: 4
Max nTPM: 385.0
Min nTPM: 176.8
RHH5233_R3605
176.8
RHH5205_R3576
385.0
RHH5262_R3634
282.9
RHH5297_R3663
203.5
Memory CD4 T-cell TFH nTPM: 208.0
Samples: 4
Max nTPM: 266.2
Min nTPM: 134.9
RHH5300_R3666
188.0
RHH5236_R3608
134.9
RHH5265_R3637
242.9
RHH5208_R3579
266.2
Memory CD4 T-cell Th1 nTPM: 180.2
Samples: 4
Max nTPM: 225.9
Min nTPM: 90.5
RHH5210_R3581
225.9
RHH5302_R3668
194.5
RHH5238_R3610
90.5
RHH5267_R3639
210.0
Memory CD4 T-cell Th1/Th17 nTPM: 235.0
Samples: 4
Max nTPM: 346.9
Min nTPM: 116.9
RHH5303_R3669
255.8
RHH5211_R3582
346.9
RHH5239_R3611
116.9
RHH5268_R3640
220.4
Memory CD4 T-cell Th17 nTPM: 230.6
Samples: 4
Max nTPM: 288.5
Min nTPM: 162.6
RHH5304_R3670
218.7
RHH5212_R3583
288.5
RHH5240_R3612
162.6
RHH5269_R3641
252.7
Memory CD4 T-cell Th2 nTPM: 229.2
Samples: 4
Max nTPM: 309.9
Min nTPM: 160.3
RHH5305_R3671
214.2
RHH5213_R3584
309.9
RHH5241_R3613
160.3
RHH5270_R3642
232.4
Naive CD4 T-cell nTPM: 177.8
Samples: 4
Max nTPM: 220.6
Min nTPM: 108.6
RHH5306_R3672
165.0
RHH5214_R3585
216.8
RHH5242_R3614
108.6
RHH5271_R3643
220.6
Naive CD8 T-cell nTPM: 171.7
Samples: 4
Max nTPM: 218.7
Min nTPM: 94.5
RHH5201_R3572
218.7
RHH5229_R3601
94.5
RHH5258_R3630
208.8
RHH5287_R3659
164.9
Non-Vd2 gdTCR nTPM: 212.5
Samples: 4
Max nTPM: 304.1
Min nTPM: 139.1
RHH5235_R3607
139.1
RHH5264_R3636
259.8
RHH5207_R3578
304.1
RHH5299_R3665
146.8
T-reg nTPM: 194.6
Samples: 4
Max nTPM: 246.2
Min nTPM: 161.7
RHH5301_R3667
163.1
RHH5237_R3609
161.7
RHH5266_R3638
207.2
RHH5209_R3580
246.2
Terminal effector memory CD4 T-cell nTPM: 176.9
Samples: 2
Max nTPM: 250.9
Min nTPM: 102.8
RHH5243_R3615
102.8
RHH5272_R3644
250.9
Terminal effector memory CD8 T-cell nTPM: 217.4
Samples: 4
Max nTPM: 256.5
Min nTPM: 166.9
RHH5232_R3604
166.9
RHH5204_R3575
256.5
RHH5261_R3633
245.5
RHH5296_R3662
200.6
Vd2 gdTCR nTPM: 249.6
Samples: 4
Max nTPM: 330.3
Min nTPM: 179.2
RHH5234_R3606
179.2
RHH5206_R3577
330.3
RHH5263_R3635
297.5
RHH5298_R3664
191.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
