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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
59.3
nTPM
Monaco:
193.6
nTPM
Schmiedel:
186.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
59.3
HPA sample
nTPM
gdT-cell nTPM: 45.3
Samples: 6
Max nTPM: 115.5
Min nTPM: 16.0
P10809_1007
36.6
P10809_1022
30.0
P10809_1041
16.0
P10809_1060
38.6
P10809_1077
35.0
P10809_1098
115.5
MAIT T-cell nTPM: 59.3
Samples: 6
Max nTPM: 99.6
Min nTPM: 31.0
P10809_1006
62.8
P10809_1024
47.0
P10809_1043
31.0
P10809_1062
74.4
P10809_1083
41.1
P10809_1097
99.6
Memory CD4 T-cell nTPM: 30.5
Samples: 6
Max nTPM: 68.3
Min nTPM: 9.9
P10809_1014
27.1
P10809_1026
21.4
P10809_1045
9.9
P10809_1064
34.5
P10809_1086
21.5
P10809_1113
68.3
Memory CD8 T-cell nTPM: 40.7
Samples: 5
Max nTPM: 73.7
Min nTPM: 13.5
P10809_1012
35.4
P10809_1027
36.1
P10809_1046
13.5
P10809_1065
44.8
P10809_1111
73.7
Naive CD4 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 34.0
Min nTPM: 7.0
P10809_1015
15.4
P10809_1030
10.8
P10809_1049
7.0
P10809_1068
19.6
P10809_1085
20.8
P10809_1112
34.0
Naive CD8 T-cell nTPM: 23.4
Samples: 6
Max nTPM: 34.3
Min nTPM: 10.9
P10809_1016
16.0
P10809_1031
18.6
P10809_1050
10.9
P10809_1069
29.7
P10809_1087
30.8
P10809_1110
34.3
T-reg nTPM: 22.0
Samples: 6
Max nTPM: 49.0
Min nTPM: 5.1
P10809_1018
25.0
P10809_1037
16.0
P10809_1056
5.1
P10809_1075
16.9
P10809_1094
20.1
P10809_1106
49.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
193.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 134.6
Samples: 4
Max nTPM: 161.0
Min nTPM: 105.5
RHH5202_R3573
125.4
RHH5230_R3602
161.0
RHH5259_R3631
146.5
RHH5288_R3660
105.5
Effector memory CD8 T-cell nTPM: 117.0
Samples: 4
Max nTPM: 145.8
Min nTPM: 82.5
RHH5203_R3574
131.0
RHH5231_R3603
108.8
RHH5260_R3632
145.8
RHH5289_R3661
82.5
MAIT T-cell nTPM: 187.3
Samples: 4
Max nTPM: 215.4
Min nTPM: 175.1
RHH5233_R3605
183.0
RHH5205_R3576
215.4
RHH5262_R3634
175.8
RHH5297_R3663
175.1
Memory CD4 T-cell TFH nTPM: 104.3
Samples: 4
Max nTPM: 123.5
Min nTPM: 87.6
RHH5300_R3666
87.6
RHH5236_R3608
123.5
RHH5265_R3637
100.8
RHH5208_R3579
105.1
Memory CD4 T-cell Th1 nTPM: 107.1
Samples: 4
Max nTPM: 119.4
Min nTPM: 91.0
RHH5210_R3581
104.7
RHH5302_R3668
91.0
RHH5238_R3610
119.4
RHH5267_R3639
113.2
Memory CD4 T-cell Th1/Th17 nTPM: 128.9
Samples: 4
Max nTPM: 139.8
Min nTPM: 114.0
RHH5303_R3669
130.5
RHH5211_R3582
131.2
RHH5239_R3611
139.8
RHH5268_R3640
114.0
Memory CD4 T-cell Th17 nTPM: 122.5
Samples: 4
Max nTPM: 146.3
Min nTPM: 109.5
RHH5304_R3670
146.3
RHH5212_R3583
109.5
RHH5240_R3612
122.9
RHH5269_R3641
111.2
Memory CD4 T-cell Th2 nTPM: 75.4
Samples: 4
Max nTPM: 86.2
Min nTPM: 64.4
RHH5305_R3671
86.2
RHH5213_R3584
79.7
RHH5241_R3613
64.4
RHH5270_R3642
71.2
Naive CD4 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 69.7
Min nTPM: 53.5
RHH5306_R3672
60.5
RHH5214_R3585
69.7
RHH5242_R3614
68.8
RHH5271_R3643
53.5
Naive CD8 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 74.8
Min nTPM: 47.2
RHH5201_R3572
47.2
RHH5229_R3601
74.8
RHH5258_R3630
66.3
RHH5287_R3659
64.1
Non-Vd2 gdTCR nTPM: 139.0
Samples: 4
Max nTPM: 158.2
Min nTPM: 109.8
RHH5235_R3607
146.8
RHH5264_R3636
141.0
RHH5207_R3578
158.2
RHH5299_R3665
109.8
T-reg nTPM: 72.6
Samples: 4
Max nTPM: 80.6
Min nTPM: 65.7
RHH5301_R3667
65.7
RHH5237_R3609
76.0
RHH5266_R3638
80.6
RHH5209_R3580
68.1
Terminal effector memory CD4 T-cell nTPM: 133.3
Samples: 2
Max nTPM: 135.4
Min nTPM: 131.1
RHH5243_R3615
131.1
RHH5272_R3644
135.4
Terminal effector memory CD8 T-cell nTPM: 161.5
Samples: 4
Max nTPM: 217.5
Min nTPM: 94.7
RHH5232_R3604
134.1
RHH5204_R3575
217.5
RHH5261_R3633
199.8
RHH5296_R3662
94.7
Vd2 gdTCR nTPM: 193.6
Samples: 4
Max nTPM: 220.2
Min nTPM: 166.0
RHH5234_R3606
180.6
RHH5206_R3577
220.2
RHH5263_R3635
207.5
RHH5298_R3664
166.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
