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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.2
nTPM
Monaco:
105.0
nTPM
Schmiedel:
139.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.2
HPA sample
nTPM
gdT-cell nTPM: 34.0
Samples: 6
Max nTPM: 40.5
Min nTPM: 31.4
P10809_1007
31.7
P10809_1022
40.5
P10809_1041
32.0
P10809_1060
32.1
P10809_1077
36.1
P10809_1098
31.4
MAIT T-cell nTPM: 38.2
Samples: 6
Max nTPM: 46.2
Min nTPM: 31.7
P10809_1006
37.9
P10809_1024
46.2
P10809_1043
31.7
P10809_1062
33.0
P10809_1083
40.7
P10809_1097
39.7
Memory CD4 T-cell nTPM: 31.5
Samples: 6
Max nTPM: 35.5
Min nTPM: 27.9
P10809_1014
34.9
P10809_1026
35.5
P10809_1045
27.9
P10809_1064
28.2
P10809_1086
33.1
P10809_1113
29.3
Memory CD8 T-cell nTPM: 32.5
Samples: 5
Max nTPM: 36.8
Min nTPM: 28.9
P10809_1012
28.9
P10809_1027
29.8
P10809_1046
34.8
P10809_1065
32.1
P10809_1111
36.8
Naive CD4 T-cell nTPM: 33.3
Samples: 6
Max nTPM: 46.5
Min nTPM: 25.7
P10809_1015
32.1
P10809_1030
25.7
P10809_1049
33.6
P10809_1068
28.2
P10809_1085
46.5
P10809_1112
33.9
Naive CD8 T-cell nTPM: 31.9
Samples: 6
Max nTPM: 39.3
Min nTPM: 26.2
P10809_1016
31.1
P10809_1031
39.3
P10809_1050
27.1
P10809_1069
26.2
P10809_1087
37.9
P10809_1110
29.6
T-reg nTPM: 37.5
Samples: 6
Max nTPM: 46.3
Min nTPM: 32.0
P10809_1018
36.9
P10809_1037
46.3
P10809_1056
32.0
P10809_1075
38.1
P10809_1094
32.2
P10809_1106
39.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
105.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 71.2
Samples: 4
Max nTPM: 92.2
Min nTPM: 53.5
RHH5202_R3573
92.2
RHH5230_R3602
71.4
RHH5259_R3631
67.8
RHH5288_R3660
53.5
Effector memory CD8 T-cell nTPM: 92.2
Samples: 4
Max nTPM: 115.1
Min nTPM: 70.9
RHH5203_R3574
115.1
RHH5231_R3603
70.9
RHH5260_R3632
97.6
RHH5289_R3661
85.2
MAIT T-cell nTPM: 87.3
Samples: 4
Max nTPM: 109.2
Min nTPM: 72.2
RHH5233_R3605
72.2
RHH5205_R3576
109.2
RHH5262_R3634
77.3
RHH5297_R3663
90.3
Memory CD4 T-cell TFH nTPM: 76.4
Samples: 4
Max nTPM: 91.0
Min nTPM: 60.4
RHH5300_R3666
60.4
RHH5236_R3608
70.1
RHH5265_R3637
91.0
RHH5208_R3579
84.2
Memory CD4 T-cell Th1 nTPM: 71.6
Samples: 4
Max nTPM: 81.2
Min nTPM: 64.6
RHH5210_R3581
72.2
RHH5302_R3668
64.6
RHH5238_R3610
68.4
RHH5267_R3639
81.2
Memory CD4 T-cell Th1/Th17 nTPM: 97.2
Samples: 4
Max nTPM: 111.6
Min nTPM: 80.3
RHH5303_R3669
88.9
RHH5211_R3582
111.6
RHH5239_R3611
108.1
RHH5268_R3640
80.3
Memory CD4 T-cell Th17 nTPM: 82.3
Samples: 4
Max nTPM: 86.4
Min nTPM: 78.4
RHH5304_R3670
78.4
RHH5212_R3583
80.2
RHH5240_R3612
84.0
RHH5269_R3641
86.4
Memory CD4 T-cell Th2 nTPM: 83.8
Samples: 4
Max nTPM: 91.6
Min nTPM: 78.3
RHH5305_R3671
78.6
RHH5213_R3584
91.6
RHH5241_R3613
78.3
RHH5270_R3642
86.7
Naive CD4 T-cell nTPM: 82.0
Samples: 4
Max nTPM: 98.9
Min nTPM: 73.4
RHH5306_R3672
81.7
RHH5214_R3585
73.4
RHH5242_R3614
98.9
RHH5271_R3643
74.1
Naive CD8 T-cell nTPM: 68.0
Samples: 4
Max nTPM: 94.4
Min nTPM: 43.4
RHH5201_R3572
94.4
RHH5229_R3601
43.4
RHH5258_R3630
67.8
RHH5287_R3659
66.2
Non-Vd2 gdTCR nTPM: 84.5
Samples: 4
Max nTPM: 97.0
Min nTPM: 64.5
RHH5235_R3607
89.8
RHH5264_R3636
86.5
RHH5207_R3578
97.0
RHH5299_R3665
64.5
T-reg nTPM: 81.1
Samples: 4
Max nTPM: 89.7
Min nTPM: 76.8
RHH5301_R3667
77.4
RHH5237_R3609
80.5
RHH5266_R3638
76.8
RHH5209_R3580
89.7
Terminal effector memory CD4 T-cell nTPM: 105.0
Samples: 2
Max nTPM: 118.1
Min nTPM: 91.9
RHH5243_R3615
118.1
RHH5272_R3644
91.9
Terminal effector memory CD8 T-cell nTPM: 90.6
Samples: 4
Max nTPM: 101.1
Min nTPM: 76.6
RHH5232_R3604
91.4
RHH5204_R3575
93.3
RHH5261_R3633
101.1
RHH5296_R3662
76.6
Vd2 gdTCR nTPM: 78.4
Samples: 4
Max nTPM: 93.2
Min nTPM: 62.5
RHH5234_R3606
62.5
RHH5206_R3577
93.2
RHH5263_R3635
85.4
RHH5298_R3664
72.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
