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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
99.4
nTPM
Monaco:
199.5
nTPM
Schmiedel:
48.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
99.4
HPA sample
nTPM
gdT-cell nTPM: 94.5
Samples: 6
Max nTPM: 108.4
Min nTPM: 68.5
P10809_1007
68.5
P10809_1022
106.3
P10809_1041
98.6
P10809_1060
102.2
P10809_1077
108.4
P10809_1098
83.1
MAIT T-cell nTPM: 83.3
Samples: 6
Max nTPM: 107.2
Min nTPM: 64.8
P10809_1006
64.8
P10809_1024
107.2
P10809_1043
84.6
P10809_1062
87.8
P10809_1083
67.9
P10809_1097
87.3
Memory CD4 T-cell nTPM: 85.6
Samples: 6
Max nTPM: 100.0
Min nTPM: 76.8
P10809_1014
77.1
P10809_1026
81.6
P10809_1045
96.1
P10809_1064
82.0
P10809_1086
100.0
P10809_1113
76.8
Memory CD8 T-cell nTPM: 91.9
Samples: 5
Max nTPM: 99.1
Min nTPM: 80.8
P10809_1012
80.8
P10809_1027
89.0
P10809_1046
99.1
P10809_1065
96.7
P10809_1111
94.0
Naive CD4 T-cell nTPM: 89.1
Samples: 6
Max nTPM: 96.1
Min nTPM: 78.5
P10809_1015
80.7
P10809_1030
96.1
P10809_1049
87.5
P10809_1068
95.5
P10809_1085
96.1
P10809_1112
78.5
Naive CD8 T-cell nTPM: 99.4
Samples: 6
Max nTPM: 110.9
Min nTPM: 83.5
P10809_1016
83.5
P10809_1031
100.4
P10809_1050
97.9
P10809_1069
110.8
P10809_1087
110.9
P10809_1110
92.9
T-reg nTPM: 92.0
Samples: 6
Max nTPM: 111.4
Min nTPM: 74.2
P10809_1018
74.2
P10809_1037
88.3
P10809_1056
99.2
P10809_1075
87.7
P10809_1094
111.4
P10809_1106
91.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
199.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 130.8
Samples: 4
Max nTPM: 161.5
Min nTPM: 91.6
RHH5202_R3573
161.5
RHH5230_R3602
120.3
RHH5259_R3631
91.6
RHH5288_R3660
149.6
Effector memory CD8 T-cell nTPM: 188.8
Samples: 4
Max nTPM: 232.0
Min nTPM: 170.7
RHH5203_R3574
232.0
RHH5231_R3603
170.7
RHH5260_R3632
179.6
RHH5289_R3661
172.8
MAIT T-cell nTPM: 139.0
Samples: 4
Max nTPM: 164.3
Min nTPM: 121.7
RHH5233_R3605
136.0
RHH5205_R3576
133.9
RHH5262_R3634
164.3
RHH5297_R3663
121.7
Memory CD4 T-cell TFH nTPM: 148.0
Samples: 4
Max nTPM: 181.5
Min nTPM: 122.7
RHH5300_R3666
122.7
RHH5236_R3608
139.0
RHH5265_R3637
148.6
RHH5208_R3579
181.5
Memory CD4 T-cell Th1 nTPM: 122.7
Samples: 4
Max nTPM: 140.5
Min nTPM: 90.4
RHH5210_R3581
135.3
RHH5302_R3668
140.5
RHH5238_R3610
90.4
RHH5267_R3639
124.6
Memory CD4 T-cell Th1/Th17 nTPM: 121.5
Samples: 4
Max nTPM: 145.2
Min nTPM: 82.3
RHH5303_R3669
145.2
RHH5211_R3582
142.1
RHH5239_R3611
82.3
RHH5268_R3640
116.2
Memory CD4 T-cell Th17 nTPM: 121.3
Samples: 4
Max nTPM: 143.4
Min nTPM: 103.2
RHH5304_R3670
143.4
RHH5212_R3583
108.5
RHH5240_R3612
129.9
RHH5269_R3641
103.2
Memory CD4 T-cell Th2 nTPM: 145.0
Samples: 4
Max nTPM: 152.4
Min nTPM: 135.2
RHH5305_R3671
135.2
RHH5213_R3584
152.4
RHH5241_R3613
148.8
RHH5270_R3642
143.5
Naive CD4 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 136.4
Min nTPM: 86.4
RHH5306_R3672
119.5
RHH5214_R3585
136.4
RHH5242_R3614
86.4
RHH5271_R3643
130.1
Naive CD8 T-cell nTPM: 117.4
Samples: 4
Max nTPM: 181.1
Min nTPM: 75.8
RHH5201_R3572
181.1
RHH5229_R3601
75.8
RHH5258_R3630
95.9
RHH5287_R3659
116.8
Non-Vd2 gdTCR nTPM: 199.5
Samples: 4
Max nTPM: 258.9
Min nTPM: 148.7
RHH5235_R3607
148.7
RHH5264_R3636
258.9
RHH5207_R3578
238.1
RHH5299_R3665
152.2
T-reg nTPM: 137.9
Samples: 4
Max nTPM: 150.0
Min nTPM: 128.4
RHH5301_R3667
142.0
RHH5237_R3609
150.0
RHH5266_R3638
131.3
RHH5209_R3580
128.4
Terminal effector memory CD4 T-cell nTPM: 184.3
Samples: 2
Max nTPM: 188.6
Min nTPM: 179.9
RHH5243_R3615
179.9
RHH5272_R3644
188.6
Terminal effector memory CD8 T-cell nTPM: 192.6
Samples: 4
Max nTPM: 213.5
Min nTPM: 151.5
RHH5232_R3604
213.5
RHH5204_R3575
211.7
RHH5261_R3633
151.5
RHH5296_R3662
193.8
Vd2 gdTCR nTPM: 131.9
Samples: 4
Max nTPM: 173.2
Min nTPM: 94.5
RHH5234_R3606
94.5
RHH5206_R3577
154.1
RHH5263_R3635
173.2
RHH5298_R3664
105.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
