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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
31.4
nTPM
Monaco:
1495.6
nTPM
Schmiedel:
546.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
31.4
HPA sample
nTPM
gdT-cell nTPM: 22.4
Samples: 6
Max nTPM: 32.8
Min nTPM: 11.1
P10809_1007
11.1
P10809_1022
32.8
P10809_1041
24.8
P10809_1060
32.3
P10809_1077
16.1
P10809_1098
17.2
MAIT T-cell nTPM: 19.5
Samples: 6
Max nTPM: 26.5
Min nTPM: 6.4
P10809_1006
15.2
P10809_1024
25.8
P10809_1043
26.5
P10809_1062
23.6
P10809_1083
19.4
P10809_1097
6.4
Memory CD4 T-cell nTPM: 22.2
Samples: 6
Max nTPM: 30.3
Min nTPM: 15.7
P10809_1014
21.5
P10809_1026
30.3
P10809_1045
25.1
P10809_1064
18.2
P10809_1086
15.7
P10809_1113
22.2
Memory CD8 T-cell nTPM: 18.6
Samples: 5
Max nTPM: 27.0
Min nTPM: 12.0
P10809_1012
19.7
P10809_1027
27.0
P10809_1046
18.4
P10809_1065
12.0
P10809_1111
15.7
Naive CD4 T-cell nTPM: 12.2
Samples: 6
Max nTPM: 19.6
Min nTPM: 9.6
P10809_1015
10.0
P10809_1030
11.1
P10809_1049
10.6
P10809_1068
19.6
P10809_1085
12.4
P10809_1112
9.6
Naive CD8 T-cell nTPM: 10.9
Samples: 6
Max nTPM: 13.7
Min nTPM: 6.0
P10809_1016
6.0
P10809_1031
11.3
P10809_1050
10.8
P10809_1069
12.2
P10809_1087
13.7
P10809_1110
11.5
T-reg nTPM: 31.4
Samples: 6
Max nTPM: 49.4
Min nTPM: 17.3
P10809_1018
17.3
P10809_1037
25.8
P10809_1056
49.4
P10809_1075
40.4
P10809_1094
32.4
P10809_1106
22.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1495.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1310.8
Samples: 4
Max nTPM: 1664.2
Min nTPM: 883.6
RHH5202_R3573
1664.2
RHH5230_R3602
1589.1
RHH5259_R3631
1106.1
RHH5288_R3660
883.6
Effector memory CD8 T-cell nTPM: 1044.3
Samples: 4
Max nTPM: 1201.0
Min nTPM: 916.7
RHH5203_R3574
1201.0
RHH5231_R3603
1015.8
RHH5260_R3632
1043.7
RHH5289_R3661
916.7
MAIT T-cell nTPM: 1357.9
Samples: 4
Max nTPM: 2346.0
Min nTPM: 892.7
RHH5233_R3605
1188.8
RHH5205_R3576
2346.0
RHH5262_R3634
1004.0
RHH5297_R3663
892.7
Memory CD4 T-cell TFH nTPM: 1154.0
Samples: 4
Max nTPM: 1667.3
Min nTPM: 723.8
RHH5300_R3666
723.8
RHH5236_R3608
1667.3
RHH5265_R3637
801.5
RHH5208_R3579
1423.3
Memory CD4 T-cell Th1 nTPM: 882.5
Samples: 4
Max nTPM: 1123.5
Min nTPM: 758.9
RHH5210_R3581
852.4
RHH5302_R3668
758.9
RHH5238_R3610
1123.5
RHH5267_R3639
795.3
Memory CD4 T-cell Th1/Th17 nTPM: 1495.6
Samples: 4
Max nTPM: 2087.7
Min nTPM: 1020.7
RHH5303_R3669
1326.0
RHH5211_R3582
2087.7
RHH5239_R3611
1548.1
RHH5268_R3640
1020.7
Memory CD4 T-cell Th17 nTPM: 1451.4
Samples: 4
Max nTPM: 2017.1
Min nTPM: 945.9
RHH5304_R3670
1195.3
RHH5212_R3583
1647.2
RHH5240_R3612
2017.1
RHH5269_R3641
945.9
Memory CD4 T-cell Th2 nTPM: 1142.3
Samples: 4
Max nTPM: 1517.6
Min nTPM: 897.7
RHH5305_R3671
897.7
RHH5213_R3584
1517.6
RHH5241_R3613
1236.3
RHH5270_R3642
917.4
Naive CD4 T-cell nTPM: 514.2
Samples: 4
Max nTPM: 678.1
Min nTPM: 342.1
RHH5306_R3672
363.7
RHH5214_R3585
678.1
RHH5242_R3614
672.7
RHH5271_R3643
342.1
Naive CD8 T-cell nTPM: 624.4
Samples: 4
Max nTPM: 758.9
Min nTPM: 546.5
RHH5201_R3572
626.0
RHH5229_R3601
758.9
RHH5258_R3630
566.1
RHH5287_R3659
546.5
Non-Vd2 gdTCR nTPM: 866.7
Samples: 4
Max nTPM: 1114.4
Min nTPM: 570.5
RHH5235_R3607
1114.4
RHH5264_R3636
772.0
RHH5207_R3578
1009.7
RHH5299_R3665
570.5
T-reg nTPM: 910.4
Samples: 4
Max nTPM: 1438.1
Min nTPM: 548.5
RHH5301_R3667
548.5
RHH5237_R3609
1438.1
RHH5266_R3638
611.0
RHH5209_R3580
1044.1
Terminal effector memory CD4 T-cell nTPM: 724.2
Samples: 2
Max nTPM: 816.8
Min nTPM: 631.5
RHH5243_R3615
816.8
RHH5272_R3644
631.5
Terminal effector memory CD8 T-cell nTPM: 876.9
Samples: 4
Max nTPM: 988.5
Min nTPM: 726.1
RHH5232_R3604
988.5
RHH5204_R3575
936.6
RHH5261_R3633
856.5
RHH5296_R3662
726.1
Vd2 gdTCR nTPM: 1148.7
Samples: 4
Max nTPM: 1454.0
Min nTPM: 746.5
RHH5234_R3606
1263.9
RHH5206_R3577
1454.0
RHH5263_R3635
1130.5
RHH5298_R3664
746.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
