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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
38.8
nTPM
Monaco:
123.7
nTPM
Schmiedel:
191.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
38.8
HPA sample
nTPM
gdT-cell nTPM: 28.3
Samples: 6
Max nTPM: 37.2
Min nTPM: 21.7
P10809_1007
24.4
P10809_1022
29.0
P10809_1041
23.2
P10809_1060
37.2
P10809_1077
34.5
P10809_1098
21.7
MAIT T-cell nTPM: 18.3
Samples: 6
Max nTPM: 25.5
Min nTPM: 11.3
P10809_1006
18.6
P10809_1024
16.8
P10809_1043
21.3
P10809_1062
16.5
P10809_1083
11.3
P10809_1097
25.5
Memory CD4 T-cell nTPM: 18.7
Samples: 6
Max nTPM: 22.0
Min nTPM: 16.8
P10809_1014
19.5
P10809_1026
16.8
P10809_1045
19.3
P10809_1064
16.8
P10809_1086
18.0
P10809_1113
22.0
Memory CD8 T-cell nTPM: 38.7
Samples: 5
Max nTPM: 43.8
Min nTPM: 30.3
P10809_1012
30.3
P10809_1027
43.5
P10809_1046
35.4
P10809_1065
40.7
P10809_1111
43.8
Naive CD4 T-cell nTPM: 16.0
Samples: 6
Max nTPM: 20.5
Min nTPM: 8.4
P10809_1015
15.2
P10809_1030
17.0
P10809_1049
8.4
P10809_1068
17.2
P10809_1085
20.5
P10809_1112
17.8
Naive CD8 T-cell nTPM: 23.1
Samples: 6
Max nTPM: 42.2
Min nTPM: 16.8
P10809_1016
20.0
P10809_1031
16.8
P10809_1050
17.8
P10809_1069
42.2
P10809_1087
19.4
P10809_1110
22.4
T-reg nTPM: 9.8
Samples: 6
Max nTPM: 15.9
Min nTPM: 0.0
P10809_1018
14.4
P10809_1037
15.9
P10809_1056
0.0
P10809_1075
1.7
P10809_1094
13.5
P10809_1106
13.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
123.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 96.2
Samples: 4
Max nTPM: 109.3
Min nTPM: 87.5
RHH5202_R3573
109.3
RHH5230_R3602
87.5
RHH5259_R3631
95.4
RHH5288_R3660
92.6
Effector memory CD8 T-cell nTPM: 117.2
Samples: 4
Max nTPM: 144.2
Min nTPM: 96.1
RHH5203_R3574
144.2
RHH5231_R3603
96.1
RHH5260_R3632
125.6
RHH5289_R3661
103.0
MAIT T-cell nTPM: 81.4
Samples: 4
Max nTPM: 109.1
Min nTPM: 67.7
RHH5233_R3605
67.7
RHH5205_R3576
109.1
RHH5262_R3634
74.3
RHH5297_R3663
74.4
Memory CD4 T-cell TFH nTPM: 77.7
Samples: 4
Max nTPM: 91.9
Min nTPM: 67.1
RHH5300_R3666
74.2
RHH5236_R3608
67.1
RHH5265_R3637
77.7
RHH5208_R3579
91.9
Memory CD4 T-cell Th1 nTPM: 78.1
Samples: 4
Max nTPM: 88.0
Min nTPM: 58.4
RHH5210_R3581
82.4
RHH5302_R3668
58.4
RHH5238_R3610
88.0
RHH5267_R3639
83.7
Memory CD4 T-cell Th1/Th17 nTPM: 96.1
Samples: 4
Max nTPM: 122.8
Min nTPM: 77.0
RHH5303_R3669
77.0
RHH5211_R3582
105.6
RHH5239_R3611
122.8
RHH5268_R3640
79.1
Memory CD4 T-cell Th17 nTPM: 80.4
Samples: 4
Max nTPM: 97.8
Min nTPM: 63.7
RHH5304_R3670
63.7
RHH5212_R3583
97.8
RHH5240_R3612
82.9
RHH5269_R3641
77.0
Memory CD4 T-cell Th2 nTPM: 68.0
Samples: 4
Max nTPM: 85.9
Min nTPM: 60.6
RHH5305_R3671
63.3
RHH5213_R3584
85.9
RHH5241_R3613
62.0
RHH5270_R3642
60.6
Naive CD4 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 93.4
Min nTPM: 58.0
RHH5306_R3672
58.0
RHH5214_R3585
68.9
RHH5242_R3614
64.7
RHH5271_R3643
93.4
Naive CD8 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 110.9
Min nTPM: 60.3
RHH5201_R3572
110.9
RHH5229_R3601
103.8
RHH5258_R3630
76.7
RHH5287_R3659
60.3
Non-Vd2 gdTCR nTPM: 115.7
Samples: 4
Max nTPM: 173.1
Min nTPM: 71.0
RHH5235_R3607
130.8
RHH5264_R3636
87.9
RHH5207_R3578
173.1
RHH5299_R3665
71.0
T-reg nTPM: 68.1
Samples: 4
Max nTPM: 75.2
Min nTPM: 55.0
RHH5301_R3667
55.0
RHH5237_R3609
70.6
RHH5266_R3638
71.7
RHH5209_R3580
75.2
Terminal effector memory CD4 T-cell nTPM: 123.7
Samples: 2
Max nTPM: 166.1
Min nTPM: 81.3
RHH5243_R3615
81.3
RHH5272_R3644
166.1
Terminal effector memory CD8 T-cell nTPM: 102.3
Samples: 4
Max nTPM: 120.0
Min nTPM: 87.3
RHH5232_R3604
97.9
RHH5204_R3575
103.8
RHH5261_R3633
120.0
RHH5296_R3662
87.3
Vd2 gdTCR nTPM: 87.3
Samples: 4
Max nTPM: 126.5
Min nTPM: 51.6
RHH5234_R3606
69.2
RHH5206_R3577
126.5
RHH5263_R3635
101.7
RHH5298_R3664
51.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
