HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:59.7 nTPM
HPA Brain:112.9 nTPM
GTEx:59.7 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Pig:68.5 nTPM
Mouse:136.2 nTPM
Allen mouse:13.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064316
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.9
Sample id Sample description nTPM
Hippocampus
nTPM: 81.6
2621 Female, age 67, right hemisphere 97.8
1898 Male, age 80, left hemisphere 85.7
2148 Female, age 91, left hemisphere 83.9
2529 Female, age 94, left hemisphere 79.1
1855 Male, age 76, left hemisphere 75.5
1911 Female, age 85, right hemisphere 67.5
Dentate gyrus
nTPM: 77.9
1927 Female, age 91, both hemispheres 91.3
2530 Female, age 94, left hemisphere 84.5
2531 Female, age 67, both hemispheres 77.8
2528 Male, age 74, both hemispheres 72.4
2246 Female, age 85, both hemispheres 70.8
2010 Male, age 76, both hemispheres 70.3
Entorhinal gyrus
nTPM: 98.0
2613 Female, age 94, left hemisphere 132.0
2686 Male, age 75, right hemisphere 103.3
2764 Male, age 80, right hemisphere 102.7
1938 Female, age 85, left hemisphere 94.9
1787 Male, age 76, left hemisphere 89.9
2117 Female, age 91, right hemisphere 65.4
Hippocampus, CA1
nTPM: 80.7
2749 Male, age 80, left hemisphere 100.9
2082 Female, age 91, right hemisphere 79.8
1873 Female, age 85, both hemispheres 78.7
2527 Male, age 74, both hemispheres 77.3
2045 Male, age 76, both hemispheres 67.1
Hippocampus, CA2
nTPM: 87.0
1963 Male, age 80, left hemisphere 100.4
1892 Male, age 76, both hemispheres 97.5
2437 Female, age 94, left hemisphere 91.3
1940 Female, age 85, left hemisphere 82.2
2113 Female, age 91, right hemisphere 81.1
2249 Male, age 74, both hemispheres 69.6
Hippocampus, CA3
nTPM: 85.1
2861 Female, age 67, both hemispheres 110.0
2137 Male, age 80, left hemisphere 100.1
1867 Male, age 76, both hemispheres 83.1
2620 Female, age 94, left hemisphere 78.8
1891 Female, age 85, both hemispheres 72.0
2436 Male, age 74, both hemispheres 66.5
Parahippocampal cortex
nTPM: 100.5
2622 Female, age 67, right hemisphere 129.6
1850 Male, age 80, both hemispheres 113.8
2245 Female, age 91, both hemispheres 103.2
2532 Female, age 72, left hemisphere 102.7
2693 Female, age 94, both hemispheres 102.1
1933 Female, age 85, both hemispheres 98.5
1990 Female, age 91, right hemisphere 94.7
2692 Male, age 74, both hemispheres 92.2
2250 Female, age 67, right hemisphere 89.7
2018 Male, age 76, both hemispheres 79.1
Perirhinal gyrus
nTPM: 112.9
1847 Female, age 91, left hemisphere 123.5
1794 Male, age 80, right hemisphere 121.4
1841 Female, age 85, right hemisphere 114.7
2521 Female, age 94, right hemisphere 114.5
2848 Male, age 76, right hemisphere 90.2
Subiculum
nTPM: 77.0
2619 Male, age 74, both hemispheres 90.2
1901 Male, age 80, both hemispheres 82.8
1977 Female, age 85, both hemispheres 82.3
2438 Female, age 94, left hemisphere 74.8
2729 Female, age 91, right hemisphere 68.3
2042 Male, age 76, both hemispheres 63.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.7
Samples: 197

Max nTPM: 141.8
Min nTPM: 20.1
Std nTPM: 25.9
Median nTPM: 55.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 141.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 136.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 130.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 129.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 128.7
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 127.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 124.3
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 119.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 116.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 116.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 113.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.3
FF:10153-102I9 76 years, female 55.3
FF:10169-103B7 60 years, female 37.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 68.5
Pig sample Sample description nTPM
Subiculum
nTPM: 52.3
Samples: 4

Max nTPM: 68.0
Min nTPM: 42.6
Sample A Female 68.0
Sample B Female 49.5
Sample C Male 49.0
Sample D Male 42.6
Dorsal hippocampus
nTPM: 41.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 29.0
Sample A Female 48.3
Sample B Female 47.4
Sample C Male 42.0
Sample D Male 29.0
Entorhinal cortex
nTPM: 68.5
Samples: 4

Max nTPM: 75.1
Min nTPM: 58.1
Sample A Female 68.3
Sample B Female 72.4
Sample C Male 75.1
Sample D Male 58.1
Ventral hippocampus
nTPM: 44.4
Samples: 4

Max nTPM: 55.4
Min nTPM: 37.4
Sample A Female 39.8
Sample B Female 37.4
Sample C Male 55.4
Sample D Male 45.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 136.2
Samples: 4

Max nTPM: 143.3
Min nTPM: 121.6
Sample A Male 137.8
Sample B Male 142.0
Sample C Female 121.6
Sample D Female 143.3
Hippocampal formation
nTPM: 102.2
Samples: 4

Max nTPM: 109.6
Min nTPM: 96.6
Sample A Male 109.6
Sample B Male 102.5
Sample C Female 99.9
Sample D Female 96.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.2
71764425 Antisense, RP_050926_01_B09, Mouse strain C57BL/6J (56 days, male) 13.2

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