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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
144.4
nTPM
Monaco:
136.2
nTPM
Schmiedel:
69.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
144.4
HPA sample
nTPM
gdT-cell nTPM: 73.7
Samples: 6
Max nTPM: 86.1
Min nTPM: 65.1
P10809_1007
65.1
P10809_1022
71.9
P10809_1041
86.1
P10809_1060
67.3
P10809_1077
85.9
P10809_1098
66.0
MAIT T-cell nTPM: 91.3
Samples: 6
Max nTPM: 114.2
Min nTPM: 68.4
P10809_1006
88.7
P10809_1024
109.0
P10809_1043
68.4
P10809_1062
88.4
P10809_1083
114.2
P10809_1097
79.3
Memory CD4 T-cell nTPM: 102.3
Samples: 6
Max nTPM: 110.0
Min nTPM: 88.0
P10809_1014
110.0
P10809_1026
98.4
P10809_1045
105.0
P10809_1064
88.0
P10809_1086
106.0
P10809_1113
106.1
Memory CD8 T-cell nTPM: 88.6
Samples: 5
Max nTPM: 108.6
Min nTPM: 63.1
P10809_1012
89.5
P10809_1027
97.2
P10809_1046
63.1
P10809_1065
84.5
P10809_1111
108.6
Naive CD4 T-cell nTPM: 93.4
Samples: 6
Max nTPM: 109.6
Min nTPM: 83.9
P10809_1015
109.6
P10809_1030
83.9
P10809_1049
89.1
P10809_1068
91.5
P10809_1085
90.7
P10809_1112
95.8
Naive CD8 T-cell nTPM: 95.6
Samples: 6
Max nTPM: 118.1
Min nTPM: 84.3
P10809_1016
118.1
P10809_1031
100.3
P10809_1050
84.3
P10809_1069
84.8
P10809_1087
84.9
P10809_1110
100.9
T-reg nTPM: 144.4
Samples: 6
Max nTPM: 183.5
Min nTPM: 119.4
P10809_1018
121.5
P10809_1037
183.5
P10809_1056
119.4
P10809_1075
156.8
P10809_1094
124.8
P10809_1106
160.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.3
Samples: 4
Max nTPM: 187.4
Min nTPM: 74.4
RHH5202_R3573
108.2
RHH5230_R3602
83.0
RHH5259_R3631
74.4
RHH5288_R3660
187.4
Effector memory CD8 T-cell nTPM: 94.9
Samples: 4
Max nTPM: 120.6
Min nTPM: 59.8
RHH5203_R3574
120.6
RHH5231_R3603
114.7
RHH5260_R3632
59.8
RHH5289_R3661
84.6
MAIT T-cell nTPM: 91.8
Samples: 4
Max nTPM: 133.6
Min nTPM: 63.8
RHH5233_R3605
95.7
RHH5205_R3576
63.8
RHH5262_R3634
73.9
RHH5297_R3663
133.6
Memory CD4 T-cell TFH nTPM: 136.3
Samples: 4
Max nTPM: 163.8
Min nTPM: 112.6
RHH5300_R3666
112.6
RHH5236_R3608
150.5
RHH5265_R3637
118.1
RHH5208_R3579
163.8
Memory CD4 T-cell Th1 nTPM: 123.7
Samples: 4
Max nTPM: 182.3
Min nTPM: 90.0
RHH5210_R3581
117.4
RHH5302_R3668
182.3
RHH5238_R3610
105.1
RHH5267_R3639
90.0
Memory CD4 T-cell Th1/Th17 nTPM: 106.2
Samples: 4
Max nTPM: 155.6
Min nTPM: 55.9
RHH5303_R3669
155.6
RHH5211_R3582
131.5
RHH5239_R3611
55.9
RHH5268_R3640
81.6
Memory CD4 T-cell Th17 nTPM: 92.7
Samples: 4
Max nTPM: 128.0
Min nTPM: 68.4
RHH5304_R3670
93.3
RHH5212_R3583
128.0
RHH5240_R3612
68.4
RHH5269_R3641
81.2
Memory CD4 T-cell Th2 nTPM: 121.2
Samples: 4
Max nTPM: 171.8
Min nTPM: 77.5
RHH5305_R3671
134.5
RHH5213_R3584
100.9
RHH5241_R3613
171.8
RHH5270_R3642
77.5
Naive CD4 T-cell nTPM: 114.2
Samples: 4
Max nTPM: 130.7
Min nTPM: 97.6
RHH5306_R3672
130.7
RHH5214_R3585
121.7
RHH5242_R3614
106.6
RHH5271_R3643
97.6
Naive CD8 T-cell nTPM: 93.2
Samples: 4
Max nTPM: 129.0
Min nTPM: 60.5
RHH5201_R3572
93.7
RHH5229_R3601
60.5
RHH5258_R3630
129.0
RHH5287_R3659
89.4
Non-Vd2 gdTCR nTPM: 89.8
Samples: 4
Max nTPM: 137.8
Min nTPM: 47.0
RHH5235_R3607
47.0
RHH5264_R3636
97.8
RHH5207_R3578
76.7
RHH5299_R3665
137.8
T-reg nTPM: 111.5
Samples: 4
Max nTPM: 138.9
Min nTPM: 86.5
RHH5301_R3667
138.9
RHH5237_R3609
127.0
RHH5266_R3638
86.5
RHH5209_R3580
93.4
Terminal effector memory CD4 T-cell nTPM: 81.2
Samples: 2
Max nTPM: 107.5
Min nTPM: 54.8
RHH5243_R3615
54.8
RHH5272_R3644
107.5
Terminal effector memory CD8 T-cell nTPM: 115.6
Samples: 4
Max nTPM: 180.8
Min nTPM: 62.0
RHH5232_R3604
82.9
RHH5204_R3575
180.8
RHH5261_R3633
62.0
RHH5296_R3662
136.6
Vd2 gdTCR nTPM: 118.2
Samples: 4
Max nTPM: 170.6
Min nTPM: 69.4
RHH5234_R3606
88.4
RHH5206_R3577
144.2
RHH5263_R3635
69.4
RHH5298_R3664
170.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
