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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.3
nTPM
Monaco:
135.9
nTPM
Schmiedel:
229.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.3
HPA sample
nTPM
gdT-cell nTPM: 64.3
Samples: 6
Max nTPM: 85.4
Min nTPM: 38.1
P10809_1007
85.4
P10809_1022
62.5
P10809_1041
80.0
P10809_1060
38.1
P10809_1077
49.3
P10809_1098
70.4
MAIT T-cell nTPM: 75.2
Samples: 6
Max nTPM: 107.3
Min nTPM: 50.7
P10809_1006
72.8
P10809_1024
56.2
P10809_1043
107.0
P10809_1062
50.7
P10809_1083
57.4
P10809_1097
107.3
Memory CD4 T-cell nTPM: 70.0
Samples: 6
Max nTPM: 96.2
Min nTPM: 42.9
P10809_1014
82.6
P10809_1026
96.2
P10809_1045
87.2
P10809_1064
59.0
P10809_1086
42.9
P10809_1113
51.8
Memory CD8 T-cell nTPM: 70.3
Samples: 5
Max nTPM: 83.6
Min nTPM: 50.6
P10809_1012
82.3
P10809_1027
79.8
P10809_1046
83.6
P10809_1065
50.6
P10809_1111
55.4
Naive CD4 T-cell nTPM: 62.2
Samples: 6
Max nTPM: 99.9
Min nTPM: 34.8
P10809_1015
72.3
P10809_1030
72.4
P10809_1049
99.9
P10809_1068
42.1
P10809_1085
34.8
P10809_1112
51.9
Naive CD8 T-cell nTPM: 79.2
Samples: 6
Max nTPM: 135.0
Min nTPM: 35.5
P10809_1016
85.4
P10809_1031
135.0
P10809_1050
96.1
P10809_1069
60.3
P10809_1087
35.5
P10809_1110
62.6
T-reg nTPM: 86.3
Samples: 6
Max nTPM: 119.9
Min nTPM: 66.9
P10809_1018
75.2
P10809_1037
83.6
P10809_1056
119.9
P10809_1075
77.6
P10809_1094
66.9
P10809_1106
94.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
135.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.9
Samples: 4
Max nTPM: 150.0
Min nTPM: 61.5
RHH5202_R3573
67.5
RHH5230_R3602
150.0
RHH5259_R3631
68.7
RHH5288_R3660
61.5
Effector memory CD8 T-cell nTPM: 110.5
Samples: 4
Max nTPM: 174.7
Min nTPM: 75.7
RHH5203_R3574
174.7
RHH5231_R3603
111.4
RHH5260_R3632
80.2
RHH5289_R3661
75.7
MAIT T-cell nTPM: 107.2
Samples: 4
Max nTPM: 143.5
Min nTPM: 91.5
RHH5233_R3605
98.3
RHH5205_R3576
95.3
RHH5262_R3634
143.5
RHH5297_R3663
91.5
Memory CD4 T-cell TFH nTPM: 81.9
Samples: 4
Max nTPM: 128.4
Min nTPM: 42.7
RHH5300_R3666
83.1
RHH5236_R3608
128.4
RHH5265_R3637
73.2
RHH5208_R3579
42.7
Memory CD4 T-cell Th1 nTPM: 83.8
Samples: 4
Max nTPM: 113.5
Min nTPM: 62.9
RHH5210_R3581
62.9
RHH5302_R3668
68.2
RHH5238_R3610
90.5
RHH5267_R3639
113.5
Memory CD4 T-cell Th1/Th17 nTPM: 78.6
Samples: 4
Max nTPM: 141.2
Min nTPM: 32.2
RHH5303_R3669
32.2
RHH5211_R3582
141.2
RHH5239_R3611
34.0
RHH5268_R3640
106.9
Memory CD4 T-cell Th17 nTPM: 70.6
Samples: 4
Max nTPM: 118.0
Min nTPM: 27.0
RHH5304_R3670
38.6
RHH5212_R3583
118.0
RHH5240_R3612
27.0
RHH5269_R3641
98.9
Memory CD4 T-cell Th2 nTPM: 110.1
Samples: 4
Max nTPM: 131.6
Min nTPM: 76.2
RHH5305_R3671
76.2
RHH5213_R3584
131.6
RHH5241_R3613
102.3
RHH5270_R3642
130.2
Naive CD4 T-cell nTPM: 98.1
Samples: 4
Max nTPM: 134.1
Min nTPM: 82.1
RHH5306_R3672
134.1
RHH5214_R3585
83.1
RHH5242_R3614
82.1
RHH5271_R3643
92.9
Naive CD8 T-cell nTPM: 75.4
Samples: 4
Max nTPM: 128.6
Min nTPM: 40.1
RHH5201_R3572
51.4
RHH5229_R3601
40.1
RHH5258_R3630
128.6
RHH5287_R3659
81.3
Non-Vd2 gdTCR nTPM: 116.2
Samples: 4
Max nTPM: 158.5
Min nTPM: 82.0
RHH5235_R3607
136.3
RHH5264_R3636
88.0
RHH5207_R3578
82.0
RHH5299_R3665
158.5
T-reg nTPM: 84.3
Samples: 4
Max nTPM: 92.8
Min nTPM: 66.1
RHH5301_R3667
89.9
RHH5237_R3609
92.8
RHH5266_R3638
88.4
RHH5209_R3580
66.1
Terminal effector memory CD4 T-cell nTPM: 104.0
Samples: 2
Max nTPM: 130.2
Min nTPM: 77.7
RHH5243_R3615
130.2
RHH5272_R3644
77.7
Terminal effector memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 148.0
Min nTPM: 35.9
RHH5232_R3604
110.0
RHH5204_R3575
148.0
RHH5261_R3633
89.0
RHH5296_R3662
35.9
Vd2 gdTCR nTPM: 135.9
Samples: 4
Max nTPM: 165.2
Min nTPM: 77.4
RHH5234_R3606
165.2
RHH5206_R3577
145.6
RHH5263_R3635
77.4
RHH5298_R3664
155.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
