HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:78.2 nTPM
HPA Brain:105.1 nTPM
GTEx:78.2 nTPM
FANTOM5:208.7 Scaled Tags Per Million
Pig:58.0 nTPM
Mouse:98.0 nTPM
Allen mouse:6.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.1
Sample id Sample description nTPM
Hippocampus
nTPM: 97.3
2529 Female, age 94, left hemisphere 119.5
2148 Female, age 91, left hemisphere 99.6
2621 Female, age 67, right hemisphere 94.8
1911 Female, age 85, right hemisphere 94.1
1855 Male, age 76, left hemisphere 92.3
1898 Male, age 80, left hemisphere 83.2
Dentate gyrus
nTPM: 87.9
2530 Female, age 94, left hemisphere 112.8
2246 Female, age 85, both hemispheres 91.0
2531 Female, age 67, both hemispheres 89.1
2528 Male, age 74, both hemispheres 84.1
2010 Male, age 76, both hemispheres 78.4
1927 Female, age 91, both hemispheres 72.2
Entorhinal gyrus
nTPM: 105.1
2686 Male, age 75, right hemisphere 131.0
2117 Female, age 91, right hemisphere 121.5
2613 Female, age 94, left hemisphere 99.0
2764 Male, age 80, right hemisphere 97.0
1787 Male, age 76, left hemisphere 94.9
1938 Female, age 85, left hemisphere 87.0
Hippocampus, CA1
nTPM: 85.7
2527 Male, age 74, both hemispheres 104.8
1873 Female, age 85, both hemispheres 87.5
2749 Male, age 80, left hemisphere 86.0
2082 Female, age 91, right hemisphere 80.1
2045 Male, age 76, both hemispheres 70.1
Hippocampus, CA2
nTPM: 92.9
1963 Male, age 80, left hemisphere 111.4
2437 Female, age 94, left hemisphere 101.7
1940 Female, age 85, left hemisphere 97.4
2113 Female, age 91, right hemisphere 91.5
2249 Male, age 74, both hemispheres 83.3
1892 Male, age 76, both hemispheres 71.9
Hippocampus, CA3
nTPM: 78.2
2861 Female, age 67, both hemispheres 97.5
1891 Female, age 85, both hemispheres 95.9
2620 Female, age 94, left hemisphere 79.4
2137 Male, age 80, left hemisphere 71.3
2436 Male, age 74, both hemispheres 62.6
1867 Male, age 76, both hemispheres 62.4
Parahippocampal cortex
nTPM: 93.4
2692 Male, age 74, both hemispheres 118.0
2532 Female, age 72, left hemisphere 104.5
2245 Female, age 91, both hemispheres 101.1
2622 Female, age 67, right hemisphere 99.7
1933 Female, age 85, both hemispheres 88.1
1990 Female, age 91, right hemisphere 87.3
2018 Male, age 76, both hemispheres 86.9
2693 Female, age 94, both hemispheres 86.6
2250 Female, age 67, right hemisphere 81.3
1850 Male, age 80, both hemispheres 80.2
Perirhinal gyrus
nTPM: 80.8
2521 Female, age 94, right hemisphere 90.2
1794 Male, age 80, right hemisphere 80.8
2848 Male, age 76, right hemisphere 80.4
1847 Female, age 91, left hemisphere 77.2
1841 Female, age 85, right hemisphere 75.4
Subiculum
nTPM: 103.2
2438 Female, age 94, left hemisphere 113.8
2619 Male, age 74, both hemispheres 112.8
1977 Female, age 85, both hemispheres 101.7
2729 Female, age 91, right hemisphere 98.5
1901 Male, age 80, both hemispheres 97.3
2042 Male, age 76, both hemispheres 94.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 78.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 78.2
Samples: 197

Max nTPM: 198.9
Min nTPM: 15.5
Std nTPM: 25.6
Median nTPM: 73.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 198.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 173.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 156.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 156.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 152.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 144.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 143.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 140.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 132.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 131.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 126.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 208.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 208.7
FF:10153-102I9 76 years, female 229.5
FF:10169-103B7 60 years, female 187.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.0
Pig sample Sample description nTPM
Subiculum
nTPM: 49.1
Samples: 4

Max nTPM: 64.8
Min nTPM: 41.9
Sample A Female 64.8
Sample B Female 47.5
Sample C Male 42.3
Sample D Male 41.9
Dorsal hippocampus
nTPM: 49.7
Samples: 4

Max nTPM: 62.4
Min nTPM: 35.2
Sample A Female 62.4
Sample B Female 46.2
Sample C Male 55.0
Sample D Male 35.2
Entorhinal cortex
nTPM: 58.0
Samples: 4

Max nTPM: 66.5
Min nTPM: 54.9
Sample A Female 55.2
Sample B Female 54.9
Sample C Male 66.5
Sample D Male 55.4
Ventral hippocampus
nTPM: 45.8
Samples: 4

Max nTPM: 52.2
Min nTPM: 36.0
Sample A Female 42.9
Sample B Female 36.0
Sample C Male 52.2
Sample D Male 51.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 98.0
Samples: 4

Max nTPM: 101.4
Min nTPM: 96.0
Sample A Male 96.9
Sample B Male 96.0
Sample C Female 97.8
Sample D Female 101.4
Hippocampal formation
nTPM: 86.6
Samples: 4

Max nTPM: 91.9
Min nTPM: 84.0
Sample A Male 91.9
Sample B Male 84.0
Sample C Female 85.3
Sample D Female 85.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.6
69837922 Antisense, RP_050224_01_B10, Mouse strain C57BL/6J (56 days, male) 6.6

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