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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
78.5
nTPM
Monaco:
176.5
nTPM
Schmiedel:
94.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
78.5
HPA sample
nTPM
gdT-cell nTPM: 40.0
Samples: 6
Max nTPM: 56.3
Min nTPM: 30.7
P10809_1007
30.7
P10809_1022
56.3
P10809_1041
43.4
P10809_1060
37.1
P10809_1077
34.2
P10809_1098
38.3
MAIT T-cell nTPM: 78.5
Samples: 6
Max nTPM: 97.5
Min nTPM: 58.7
P10809_1006
58.7
P10809_1024
88.0
P10809_1043
97.5
P10809_1062
78.1
P10809_1083
61.7
P10809_1097
87.1
Memory CD4 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 41.9
Min nTPM: 31.7
P10809_1014
31.7
P10809_1026
38.4
P10809_1045
41.9
P10809_1064
32.4
P10809_1086
34.0
P10809_1113
40.5
Memory CD8 T-cell nTPM: 39.6
Samples: 5
Max nTPM: 48.3
Min nTPM: 28.3
P10809_1012
28.3
P10809_1027
46.1
P10809_1046
48.3
P10809_1065
34.5
P10809_1111
40.7
Naive CD4 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 38.3
Min nTPM: 17.3
P10809_1015
17.3
P10809_1030
38.3
P10809_1049
24.6
P10809_1068
28.2
P10809_1085
25.4
P10809_1112
22.6
Naive CD8 T-cell nTPM: 33.0
Samples: 6
Max nTPM: 37.4
Min nTPM: 25.1
P10809_1016
25.1
P10809_1031
30.9
P10809_1050
32.1
P10809_1069
37.4
P10809_1087
34.8
P10809_1110
37.4
T-reg nTPM: 47.8
Samples: 6
Max nTPM: 59.6
Min nTPM: 34.0
P10809_1018
41.8
P10809_1037
58.0
P10809_1056
34.0
P10809_1075
59.6
P10809_1094
39.8
P10809_1106
53.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
176.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 86.3
Samples: 4
Max nTPM: 120.0
Min nTPM: 58.3
RHH5202_R3573
71.9
RHH5230_R3602
120.0
RHH5259_R3631
58.3
RHH5288_R3660
94.9
Effector memory CD8 T-cell nTPM: 86.1
Samples: 4
Max nTPM: 103.2
Min nTPM: 73.8
RHH5203_R3574
82.7
RHH5231_R3603
84.8
RHH5260_R3632
73.8
RHH5289_R3661
103.2
MAIT T-cell nTPM: 176.5
Samples: 4
Max nTPM: 186.4
Min nTPM: 164.4
RHH5233_R3605
186.4
RHH5205_R3576
170.6
RHH5262_R3634
184.7
RHH5297_R3663
164.4
Memory CD4 T-cell TFH nTPM: 61.4
Samples: 4
Max nTPM: 73.4
Min nTPM: 53.0
RHH5300_R3666
73.4
RHH5236_R3608
61.0
RHH5265_R3637
53.0
RHH5208_R3579
58.3
Memory CD4 T-cell Th1 nTPM: 60.3
Samples: 4
Max nTPM: 79.0
Min nTPM: 48.2
RHH5210_R3581
51.0
RHH5302_R3668
79.0
RHH5238_R3610
48.2
RHH5267_R3639
63.0
Memory CD4 T-cell Th1/Th17 nTPM: 85.2
Samples: 4
Max nTPM: 122.4
Min nTPM: 48.0
RHH5303_R3669
122.4
RHH5211_R3582
85.2
RHH5239_R3611
48.0
RHH5268_R3640
85.3
Memory CD4 T-cell Th17 nTPM: 101.3
Samples: 4
Max nTPM: 136.3
Min nTPM: 74.2
RHH5304_R3670
136.3
RHH5212_R3583
95.0
RHH5240_R3612
99.7
RHH5269_R3641
74.2
Memory CD4 T-cell Th2 nTPM: 79.2
Samples: 4
Max nTPM: 86.1
Min nTPM: 65.5
RHH5305_R3671
84.1
RHH5213_R3584
86.1
RHH5241_R3613
81.0
RHH5270_R3642
65.5
Naive CD4 T-cell nTPM: 58.4
Samples: 4
Max nTPM: 76.8
Min nTPM: 38.3
RHH5306_R3672
67.3
RHH5214_R3585
38.3
RHH5242_R3614
76.8
RHH5271_R3643
51.0
Naive CD8 T-cell nTPM: 53.3
Samples: 4
Max nTPM: 64.8
Min nTPM: 41.6
RHH5201_R3572
49.7
RHH5229_R3601
41.6
RHH5258_R3630
56.9
RHH5287_R3659
64.8
Non-Vd2 gdTCR nTPM: 92.9
Samples: 4
Max nTPM: 97.3
Min nTPM: 90.0
RHH5235_R3607
92.2
RHH5264_R3636
92.1
RHH5207_R3578
97.3
RHH5299_R3665
90.0
T-reg nTPM: 66.5
Samples: 4
Max nTPM: 75.7
Min nTPM: 58.5
RHH5301_R3667
58.5
RHH5237_R3609
62.7
RHH5266_R3638
75.7
RHH5209_R3580
68.9
Terminal effector memory CD4 T-cell nTPM: 89.5
Samples: 2
Max nTPM: 111.3
Min nTPM: 67.6
RHH5243_R3615
111.3
RHH5272_R3644
67.6
Terminal effector memory CD8 T-cell nTPM: 96.5
Samples: 4
Max nTPM: 112.3
Min nTPM: 72.5
RHH5232_R3604
112.3
RHH5204_R3575
72.5
RHH5261_R3633
101.5
RHH5296_R3662
99.5
Vd2 gdTCR nTPM: 99.5
Samples: 4
Max nTPM: 107.1
Min nTPM: 90.7
RHH5234_R3606
104.4
RHH5206_R3577
107.1
RHH5263_R3635
90.7
RHH5298_R3664
95.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
