HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:81.5 nTPM
HPA Brain:241.7 nTPM
GTEx:81.5 nTPM
FANTOM5:144.3 Scaled Tags Per Million
Pig:203.4 nTPM
Mouse:155.7 nTPM
Allen mouse:11.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA054104Antibody HPA056817
Glial cells Not detectedMedium
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 241.7
Sample id Sample description nTPM
Hippocampus
nTPM: 233.0
2148 Female, age 91, left hemisphere 261.2
2621 Female, age 67, right hemisphere 259.7
1898 Male, age 80, left hemisphere 234.4
2529 Female, age 94, left hemisphere 221.7
1855 Male, age 76, left hemisphere 220.6
1911 Female, age 85, right hemisphere 200.5
Dentate gyrus
nTPM: 227.5
1927 Female, age 91, both hemispheres 273.8
2530 Female, age 94, left hemisphere 248.2
2531 Female, age 67, both hemispheres 233.0
2246 Female, age 85, both hemispheres 217.3
2010 Male, age 76, both hemispheres 200.4
2528 Male, age 74, both hemispheres 192.2
Entorhinal gyrus
nTPM: 222.1
2613 Female, age 94, left hemisphere 258.4
2764 Male, age 80, right hemisphere 240.8
1938 Female, age 85, left hemisphere 219.4
1787 Male, age 76, left hemisphere 217.0
2686 Male, age 75, right hemisphere 203.2
2117 Female, age 91, right hemisphere 193.5
Hippocampus, CA1
nTPM: 241.7
2749 Male, age 80, left hemisphere 314.8
2527 Male, age 74, both hemispheres 229.4
2082 Female, age 91, right hemisphere 227.6
1873 Female, age 85, both hemispheres 226.7
2045 Male, age 76, both hemispheres 210.1
Hippocampus, CA2
nTPM: 227.4
1963 Male, age 80, left hemisphere 316.5
2437 Female, age 94, left hemisphere 229.2
1892 Male, age 76, both hemispheres 228.3
2113 Female, age 91, right hemisphere 219.9
1940 Female, age 85, left hemisphere 191.5
2249 Male, age 74, both hemispheres 178.9
Hippocampus, CA3
nTPM: 228.5
2620 Female, age 94, left hemisphere 285.4
2137 Male, age 80, left hemisphere 277.0
2861 Female, age 67, both hemispheres 257.3
1867 Male, age 76, both hemispheres 199.9
1891 Female, age 85, both hemispheres 187.9
2436 Male, age 74, both hemispheres 163.4
Parahippocampal cortex
nTPM: 213.7
2245 Female, age 91, both hemispheres 270.1
1850 Male, age 80, both hemispheres 226.6
1990 Female, age 91, right hemisphere 215.0
2532 Female, age 72, left hemisphere 209.1
2693 Female, age 94, both hemispheres 207.3
2622 Female, age 67, right hemisphere 206.6
1933 Female, age 85, both hemispheres 204.8
2018 Male, age 76, both hemispheres 200.9
2250 Female, age 67, right hemisphere 198.3
2692 Male, age 74, both hemispheres 198.2
Perirhinal gyrus
nTPM: 240.4
1847 Female, age 91, left hemisphere 269.7
2521 Female, age 94, right hemisphere 268.9
1794 Male, age 80, right hemisphere 256.6
1841 Female, age 85, right hemisphere 214.2
2848 Male, age 76, right hemisphere 192.4
Subiculum
nTPM: 212.8
2438 Female, age 94, left hemisphere 228.3
1901 Male, age 80, both hemispheres 222.1
1977 Female, age 85, both hemispheres 220.4
2619 Male, age 74, both hemispheres 211.3
2042 Male, age 76, both hemispheres 201.8
2729 Female, age 91, right hemisphere 192.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.5
Samples: 197

Max nTPM: 159.3
Min nTPM: 10.1
Std nTPM: 26.8
Median nTPM: 80.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 159.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 148.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 145.9
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 141.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 140.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 139.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 133.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 131.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 131.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 131.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 129.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 144.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 144.3
FF:10153-102I9 76 years, female 154.6
FF:10169-103B7 60 years, female 133.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 203.4
Pig sample Sample description nTPM
Subiculum
nTPM: 182.1
Samples: 4

Max nTPM: 238.6
Min nTPM: 146.6
Sample A Female 238.6
Sample B Female 162.1
Sample C Male 181.0
Sample D Male 146.6
Dorsal hippocampus
nTPM: 189.6
Samples: 4

Max nTPM: 204.0
Min nTPM: 161.0
Sample A Female 204.0
Sample B Female 199.5
Sample C Male 193.7
Sample D Male 161.0
Entorhinal cortex
nTPM: 203.5
Samples: 4

Max nTPM: 217.9
Min nTPM: 195.3
Sample A Female 205.0
Sample B Female 195.6
Sample C Male 217.9
Sample D Male 195.3
Ventral hippocampus
nTPM: 175.7
Samples: 4

Max nTPM: 220.5
Min nTPM: 139.1
Sample A Female 140.8
Sample B Female 139.1
Sample C Male 202.5
Sample D Male 220.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 155.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 155.7
Samples: 4

Max nTPM: 160.4
Min nTPM: 146.7
Sample A Male 160.4
Sample B Male 146.7
Sample C Female 155.7
Sample D Female 160.1
Hippocampal formation
nTPM: 146.3
Samples: 4

Max nTPM: 149.2
Min nTPM: 138.3
Sample A Male 149.2
Sample B Male 149.2
Sample C Female 148.5
Sample D Female 138.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.9
74047777 Antisense, RP_051214_02_A02, Mouse strain C57BL/6J (56 days, male) 20.0
68203494 Antisense, RP_041208_01_D02, Mouse strain C57BL/6J (56 days, male) 16.2
70795892 Antisense, RP_050712_02_B09, Mouse strain C57BL/6J (56 days, male) 7.6
74750065 Antisense, RP_060220_05_F07, Mouse strain C57BL/6J (56 days, male) 3.7

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