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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
319.0
nTPM
FANTOM5:
240.7
Scaled Tags Per Million
Pig:
190.1
nTPM
Allen mouse:
8.8
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
319.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 210.0
2301
Female, age 85, both hemispheres
247.0
2188
Female, age 91, both hemispheres
205.2
1984
Male, age 76, both hemispheres
199.7
2090
Male, age 80, both hemispheres
188.1
Dorsal cochlear nucleus nTPM: 231.4
2802
Male, age 74, right hemisphere
256.0
2058
Male, age 76, both hemispheres
245.0
2187
Female, age 91, both hemispheres
233.4
2370
Male, age 61, both hemispheres
227.2
2378
Male, age 80, both hemispheres
195.5
Dorsal tegmental nucleus nTPM: 232.1
2083
Male, age 80, both hemispheres
258.2
1936
Male, age 76, left hemisphere
249.0
2358
Male, age 61, both hemispheres
225.6
2326
Male, age 74, both hemispheres
195.5
Dorsolateral tegmental area nTPM: 207.8
2141
Male, age 76, both hemispheres
269.0
2654
Male, age 80, both hemispheres
256.4
2751
Female, age 85, both hemispheres
207.7
2360
Male, age 74, both hemispheres
166.2
2337
Male, age 61, both hemispheres
139.8
Kolliker-Fuse nucleus nTPM: 252.2
2163
Male, age 80, both hemispheres
324.3
2793
Female, age 91, left hemisphere
262.8
2315
Male, age 76, right hemisphere
169.6
Lateral lemniscal nuclei nTPM: 291.2
2453
Male, age 74, right hemisphere
329.8
2169
Male, age 76, both hemispheres
320.8
2036
Male, age 80, both hemispheres
286.0
2746
Female, age 85, left hemisphere
271.5
2320
Female, age 91, left hemisphere
248.0
Lateral parabrachial nucleus nTPM: 245.0
2139
Female, age 85, right hemisphere
305.4
2790
Male, age 61, both hemispheres
245.0
2013
Male, age 80, both hemispheres
241.5
2792
Male, age 76, both hemispheres
188.0
Lateral vestibular nucleus nTPM: 300.5
2184
Male, age 76, both hemispheres
359.6
2311
Male, age 80, both hemispheres
241.4
Locus coeruleus nTPM: 290.1
2123
Female, age 91, both hemispheres
304.9
2317
Female, age 72, unknown
295.7
2162
Male, age 80, both hemispheres
294.0
1980
Male, age 76, both hemispheres
293.2
2014
Male, age 55, unknown
290.1
2720
Male, age 74, both hemispheres
289.8
2788
Male, age 74, unknown
262.6
Medial parabrachial nucleus nTPM: 256.3
2786
Male, age 76, both hemispheres
293.6
2156
Male, age 61, both hemispheres
292.9
2854
Male, age 80, both hemispheres
262.0
2170
Female, age 91, both hemispheres
236.8
2463
Female, age 85, right hemisphere
196.4
Medial periolivary nuclei nTPM: 274.3
2171
Female, age 85, both hemispheres
370.6
2063
Male, age 76, both hemispheres
294.7
2791
Male, age 74, right hemisphere
256.4
2458
Female, age 91, both hemispheres
236.6
2081
Male, age 80, both hemispheres
213.3
Motor facial nucleus nTPM: 292.7
2062
Male, age 76, both hemispheres
327.7
2327
Male, age 80, both hemispheres
305.2
2365
Male, age 74, right hemisphere
303.9
2697
Female, age 85, both hemispheres
287.2
2795
Female, age 91, both hemispheres
279.7
2126
Male, age 61, both hemispheres
252.6
Motor trigeminal nucleus nTPM: 259.2
2560
Male, age 74, both hemispheres
271.3
2079
Male, age 80, both hemispheres
270.0
2309
Male, age 76, both hemispheres
266.5
2335
Male, age 61, both hemispheres
262.3
2321
Female, age 91, both hemispheres
226.0
Nuclei of the trapezoid body nTPM: 302.7
2735
Female, age 85, both hemispheres
350.6
2159
Male, age 61, both hemispheres
340.1
1983
Male, age 76, both hemispheres
303.7
2166
Male, age 80, both hemispheres
269.6
2368
Female, age 91, both hemispheres
249.2
Nucleus raphe magnus nTPM: 319.0
2172
Female, age 85, both hemispheres
390.0
2160
Male, age 61, both hemispheres
377.7
2455
Male, age 74, both hemispheres
324.8
2328
Male, age 80, both hemispheres
289.2
2051
Male, age 76, both hemispheres
280.4
2459
Female, age 91, both hemispheres
251.9
Paramedian reticular nucleus nTPM: 259.8
2050
Female, age 85, both hemispheres
309.7
2313
Male, age 61, both hemispheres
274.2
2057
Male, age 80, both hemispheres
258.8
2052
Male, age 76, both hemispheres
196.6
Pedunculopontine tegmental nucleus nTPM: 223.3
1921
Female, age 85, both hemispheres
247.8
2334
Male, age 80, both hemispheres
241.1
2338
Male, age 61, both hemispheres
181.0
Pontine nuclei nTPM: 287.2
2787
Female, age 85, both hemispheres
411.0
1863
Male, age 55, unknown
306.1
1968
Male, age 76, left hemisphere
304.6
2727
Male, age 61, right hemisphere
303.9
2109
Female, age 72, unknown
267.5
2454
Male, age 74, left hemisphere
243.5
2115
Male, age 80, left hemisphere
243.3
2319
Female, age 91, both hemispheres
218.0
Pontine raphe nucleus nTPM: 277.8
2122
Female, age 85, midline
294.7
2853
Male, age 76, midline
260.9
Posteroventral cochlear nucleus nTPM: 215.7
2752
Female, age 85, both hemispheres
290.4
2070
Male, age 76, both hemispheres
241.5
2371
Male, age 61, both hemispheres
214.4
2341
Male, age 80, both hemispheres
179.9
2135
Female, age 91, both hemispheres
152.4
Principal sensory trigeminal nucleus nTPM: 304.0
2158
Male, age 61, both hemispheres
363.6
2324
Male, age 76, both hemispheres
315.1
2008
Male, age 80, left hemisphere
293.3
2367
Female, age 91, left hemisphere
243.8
Reticular pontine nucleus, caudal nTPM: 266.5
2332
Male, age 80, right hemisphere
312.7
2457
Female, age 91, both hemispheres
266.4
2092
Male, age 76, both hemispheres
259.3
2559
Male, age 74, both hemispheres
227.8
Reticular pontine nucleus, oral nTPM: 255.1
2012
Female, age 85, both hemispheres
274.1
2361
Male, age 74, both hemispheres
263.8
2167
Male, age 76, both hemispheres
257.3
1939
Male, age 80, both hemispheres
244.1
2366
Female, age 91, both hemispheres
236.2
Reticulotegmental nucleus nTPM: 266.4
2325
Male, age 76, both hemispheres
282.1
2452
Male, age 74, both hemispheres
265.7
2322
Female, age 91, both hemispheres
261.6
2333
Male, age 80, both hemispheres
256.3
Spinal trigeminal nucleus, oral nTPM: 269.2
2164
Male, age 80, both hemispheres
305.9
2737
Female, age 85, both hemispheres
257.2
1978
Male, age 76, both hemispheres
244.5
Subcoeruleus area nTPM: 246.7
2089
Male, age 76, left hemisphere
295.7
2323
Female, age 91, left hemisphere
275.1
1958
Male, age 80, both hemispheres
264.3
2451
Male, age 74, both hemispheres
205.7
2369
Female, age 85, left hemisphere
192.7
Superior olive nTPM: 274.0
1875
Female, age 85, both hemispheres
309.7
2329
Male, age 80, right hemisphere
281.7
2561
Female, age 91, both hemispheres
265.9
2020
Male, age 76, both hemispheres
258.2
2364
Male, age 74, right hemisphere
254.5
Ventral periolivary nuclei nTPM: 292.9
2130
Female, age 85, both hemispheres
357.6
2165
Male, age 80, both hemispheres
327.7
2794
Female, age 91, left hemisphere
255.4
2023
Male, age 76, both hemispheres
230.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 265.2
2449
Male, age 74, both hemispheres
314.6
1959
Male, age 76, both hemispheres
283.3
2840
Female, age 85, both hemispheres
279.7
2161
Male, age 80, both hemispheres
255.6
2359
Male, age 61, both hemispheres
229.7
2456
Female, age 91, both hemispheres
228.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
190.1
Pig sample
Sample description
nTPM
Pons nTPM: 190.1
Samples: 4
Max nTPM: 249.8
Min nTPM: 155.2
Sample A
Female
194.7
Sample B
Female
155.2
Sample C
Male
160.8
Sample D
Male
249.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
