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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
40.0
nTPM
Monaco:
303.3
nTPM
Schmiedel:
139.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.0
HPA sample
nTPM
gdT-cell nTPM: 30.5
Samples: 6
Max nTPM: 43.5
Min nTPM: 24.2
P10809_1007
27.0
P10809_1022
26.8
P10809_1041
24.2
P10809_1060
43.5
P10809_1077
28.8
P10809_1098
32.8
MAIT T-cell nTPM: 26.4
Samples: 6
Max nTPM: 31.8
Min nTPM: 20.3
P10809_1006
26.7
P10809_1024
24.6
P10809_1043
24.0
P10809_1062
30.9
P10809_1083
20.3
P10809_1097
31.8
Memory CD4 T-cell nTPM: 29.3
Samples: 6
Max nTPM: 36.4
Min nTPM: 23.5
P10809_1014
29.9
P10809_1026
30.8
P10809_1045
30.8
P10809_1064
24.5
P10809_1086
23.5
P10809_1113
36.4
Memory CD8 T-cell nTPM: 25.3
Samples: 5
Max nTPM: 31.3
Min nTPM: 20.0
P10809_1012
29.4
P10809_1027
20.0
P10809_1046
20.7
P10809_1065
24.9
P10809_1111
31.3
Naive CD4 T-cell nTPM: 30.9
Samples: 6
Max nTPM: 36.8
Min nTPM: 23.7
P10809_1015
33.0
P10809_1030
36.8
P10809_1049
29.6
P10809_1068
23.7
P10809_1085
31.2
P10809_1112
31.3
Naive CD8 T-cell nTPM: 33.8
Samples: 6
Max nTPM: 39.6
Min nTPM: 29.1
P10809_1016
30.0
P10809_1031
39.6
P10809_1050
33.4
P10809_1069
34.6
P10809_1087
29.1
P10809_1110
35.9
T-reg nTPM: 40.0
Samples: 6
Max nTPM: 44.8
Min nTPM: 33.3
P10809_1018
44.8
P10809_1037
40.3
P10809_1056
39.5
P10809_1075
37.7
P10809_1094
33.3
P10809_1106
44.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
303.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 258.7
Samples: 4
Max nTPM: 306.0
Min nTPM: 218.3
RHH5202_R3573
277.6
RHH5230_R3602
218.3
RHH5259_R3631
232.8
RHH5288_R3660
306.0
Effector memory CD8 T-cell nTPM: 295.4
Samples: 4
Max nTPM: 370.0
Min nTPM: 200.5
RHH5203_R3574
287.8
RHH5231_R3603
200.5
RHH5260_R3632
323.2
RHH5289_R3661
370.0
MAIT T-cell nTPM: 267.5
Samples: 4
Max nTPM: 338.7
Min nTPM: 174.8
RHH5233_R3605
174.8
RHH5205_R3576
294.7
RHH5262_R3634
261.8
RHH5297_R3663
338.7
Memory CD4 T-cell TFH nTPM: 269.1
Samples: 4
Max nTPM: 322.6
Min nTPM: 200.5
RHH5300_R3666
322.6
RHH5236_R3608
200.5
RHH5265_R3637
259.6
RHH5208_R3579
293.8
Memory CD4 T-cell Th1 nTPM: 259.6
Samples: 4
Max nTPM: 333.3
Min nTPM: 177.1
RHH5210_R3581
333.3
RHH5302_R3668
266.8
RHH5238_R3610
177.1
RHH5267_R3639
261.1
Memory CD4 T-cell Th1/Th17 nTPM: 276.6
Samples: 4
Max nTPM: 336.2
Min nTPM: 227.9
RHH5303_R3669
336.2
RHH5211_R3582
294.6
RHH5239_R3611
227.9
RHH5268_R3640
247.7
Memory CD4 T-cell Th17 nTPM: 278.0
Samples: 4
Max nTPM: 328.8
Min nTPM: 225.9
RHH5304_R3670
328.8
RHH5212_R3583
294.7
RHH5240_R3612
225.9
RHH5269_R3641
262.7
Memory CD4 T-cell Th2 nTPM: 270.8
Samples: 4
Max nTPM: 345.0
Min nTPM: 207.1
RHH5305_R3671
345.0
RHH5213_R3584
306.7
RHH5241_R3613
207.1
RHH5270_R3642
224.4
Naive CD4 T-cell nTPM: 263.1
Samples: 4
Max nTPM: 294.7
Min nTPM: 186.8
RHH5306_R3672
280.8
RHH5214_R3585
294.7
RHH5242_R3614
186.8
RHH5271_R3643
290.0
Naive CD8 T-cell nTPM: 293.8
Samples: 4
Max nTPM: 369.6
Min nTPM: 203.7
RHH5201_R3572
369.6
RHH5229_R3601
203.7
RHH5258_R3630
285.7
RHH5287_R3659
316.0
Non-Vd2 gdTCR nTPM: 303.3
Samples: 4
Max nTPM: 343.6
Min nTPM: 201.6
RHH5235_R3607
201.6
RHH5264_R3636
332.6
RHH5207_R3578
335.5
RHH5299_R3665
343.6
T-reg nTPM: 294.9
Samples: 4
Max nTPM: 348.4
Min nTPM: 242.0
RHH5301_R3667
310.0
RHH5237_R3609
242.0
RHH5266_R3638
279.0
RHH5209_R3580
348.4
Terminal effector memory CD4 T-cell nTPM: 228.0
Samples: 2
Max nTPM: 234.1
Min nTPM: 221.9
RHH5243_R3615
221.9
RHH5272_R3644
234.1
Terminal effector memory CD8 T-cell nTPM: 285.9
Samples: 4
Max nTPM: 366.9
Min nTPM: 216.4
RHH5232_R3604
216.4
RHH5204_R3575
277.5
RHH5261_R3633
282.9
RHH5296_R3662
366.9
Vd2 gdTCR nTPM: 288.9
Samples: 4
Max nTPM: 321.2
Min nTPM: 207.7
RHH5234_R3606
207.7
RHH5206_R3577
306.8
RHH5263_R3635
319.7
RHH5298_R3664
321.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
