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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
195.5
nTPM
Monaco:
279.8
nTPM
Schmiedel:
228.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
195.5
HPA sample
nTPM
gdT-cell nTPM: 113.1
Samples: 6
Max nTPM: 138.7
Min nTPM: 93.6
P10809_1007
105.0
P10809_1022
136.8
P10809_1041
138.7
P10809_1060
93.6
P10809_1077
104.7
P10809_1098
100.0
MAIT T-cell nTPM: 104.5
Samples: 6
Max nTPM: 124.3
Min nTPM: 87.6
P10809_1006
91.0
P10809_1024
118.6
P10809_1043
104.8
P10809_1062
87.6
P10809_1083
100.5
P10809_1097
124.3
Memory CD4 T-cell nTPM: 135.9
Samples: 6
Max nTPM: 147.1
Min nTPM: 126.4
P10809_1014
140.8
P10809_1026
126.4
P10809_1045
142.0
P10809_1064
128.7
P10809_1086
147.1
P10809_1113
130.3
Memory CD8 T-cell nTPM: 133.2
Samples: 5
Max nTPM: 167.7
Min nTPM: 109.0
P10809_1012
109.0
P10809_1027
167.7
P10809_1046
136.5
P10809_1065
122.3
P10809_1111
130.6
Naive CD4 T-cell nTPM: 140.4
Samples: 6
Max nTPM: 159.5
Min nTPM: 127.0
P10809_1015
127.0
P10809_1030
158.6
P10809_1049
131.2
P10809_1068
159.5
P10809_1085
128.8
P10809_1112
137.3
Naive CD8 T-cell nTPM: 133.0
Samples: 6
Max nTPM: 143.9
Min nTPM: 117.4
P10809_1016
143.9
P10809_1031
117.4
P10809_1050
128.4
P10809_1069
141.5
P10809_1087
132.1
P10809_1110
134.7
T-reg nTPM: 195.6
Samples: 6
Max nTPM: 206.5
Min nTPM: 176.4
P10809_1018
192.5
P10809_1037
190.5
P10809_1056
176.4
P10809_1075
206.1
P10809_1094
201.3
P10809_1106
206.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
279.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 240.8
Samples: 4
Max nTPM: 328.3
Min nTPM: 181.0
RHH5202_R3573
328.3
RHH5230_R3602
186.0
RHH5259_R3631
181.0
RHH5288_R3660
267.7
Effector memory CD8 T-cell nTPM: 266.3
Samples: 4
Max nTPM: 344.8
Min nTPM: 170.0
RHH5203_R3574
344.8
RHH5231_R3603
261.9
RHH5260_R3632
170.0
RHH5289_R3661
288.4
MAIT T-cell nTPM: 174.8
Samples: 4
Max nTPM: 216.2
Min nTPM: 136.5
RHH5233_R3605
216.2
RHH5205_R3576
146.6
RHH5262_R3634
199.8
RHH5297_R3663
136.5
Memory CD4 T-cell TFH nTPM: 248.4
Samples: 4
Max nTPM: 279.7
Min nTPM: 218.9
RHH5300_R3666
218.9
RHH5236_R3608
233.3
RHH5265_R3637
261.7
RHH5208_R3579
279.7
Memory CD4 T-cell Th1 nTPM: 207.4
Samples: 4
Max nTPM: 238.6
Min nTPM: 158.7
RHH5210_R3581
226.8
RHH5302_R3668
238.6
RHH5238_R3610
158.7
RHH5267_R3639
205.6
Memory CD4 T-cell Th1/Th17 nTPM: 194.6
Samples: 4
Max nTPM: 264.5
Min nTPM: 137.5
RHH5303_R3669
238.1
RHH5211_R3582
264.5
RHH5239_R3611
137.5
RHH5268_R3640
138.4
Memory CD4 T-cell Th17 nTPM: 192.8
Samples: 4
Max nTPM: 213.5
Min nTPM: 156.8
RHH5304_R3670
213.5
RHH5212_R3583
208.5
RHH5240_R3612
192.4
RHH5269_R3641
156.8
Memory CD4 T-cell Th2 nTPM: 279.8
Samples: 4
Max nTPM: 335.4
Min nTPM: 234.8
RHH5305_R3671
284.7
RHH5213_R3584
264.2
RHH5241_R3613
335.4
RHH5270_R3642
234.8
Naive CD4 T-cell nTPM: 219.7
Samples: 4
Max nTPM: 234.1
Min nTPM: 212.2
RHH5306_R3672
212.2
RHH5214_R3585
234.1
RHH5242_R3614
217.4
RHH5271_R3643
215.1
Naive CD8 T-cell nTPM: 240.8
Samples: 4
Max nTPM: 326.8
Min nTPM: 142.8
RHH5201_R3572
326.8
RHH5229_R3601
142.8
RHH5258_R3630
233.2
RHH5287_R3659
260.2
Non-Vd2 gdTCR nTPM: 206.0
Samples: 4
Max nTPM: 230.9
Min nTPM: 187.2
RHH5235_R3607
187.2
RHH5264_R3636
230.9
RHH5207_R3578
199.5
RHH5299_R3665
206.4
T-reg nTPM: 257.7
Samples: 4
Max nTPM: 305.3
Min nTPM: 228.6
RHH5301_R3667
246.9
RHH5237_R3609
305.3
RHH5266_R3638
250.1
RHH5209_R3580
228.6
Terminal effector memory CD4 T-cell nTPM: 173.6
Samples: 2
Max nTPM: 178.4
Min nTPM: 168.7
RHH5243_R3615
168.7
RHH5272_R3644
178.4
Terminal effector memory CD8 T-cell nTPM: 196.5
Samples: 4
Max nTPM: 240.2
Min nTPM: 147.1
RHH5232_R3604
240.2
RHH5204_R3575
196.4
RHH5261_R3633
147.1
RHH5296_R3662
202.2
Vd2 gdTCR nTPM: 224.1
Samples: 4
Max nTPM: 227.4
Min nTPM: 218.7
RHH5234_R3606
227.4
RHH5206_R3577
218.7
RHH5263_R3635
227.3
RHH5298_R3664
222.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
