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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
374.6
nTPM
Monaco:
116.0
nTPM
Schmiedel:
69.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
374.6
HPA sample
nTPM
gdT-cell nTPM: 201.1
Samples: 6
Max nTPM: 241.2
Min nTPM: 169.8
P10809_1007
241.2
P10809_1022
173.3
P10809_1041
223.4
P10809_1060
169.8
P10809_1077
215.1
P10809_1098
184.0
MAIT T-cell nTPM: 155.7
Samples: 6
Max nTPM: 181.3
Min nTPM: 105.0
P10809_1006
105.0
P10809_1024
181.2
P10809_1043
141.6
P10809_1062
149.2
P10809_1083
175.6
P10809_1097
181.3
Memory CD4 T-cell nTPM: 207.9
Samples: 6
Max nTPM: 216.5
Min nTPM: 199.8
P10809_1014
216.3
P10809_1026
199.8
P10809_1045
216.5
P10809_1064
214.2
P10809_1086
199.9
P10809_1113
200.6
Memory CD8 T-cell nTPM: 211.7
Samples: 5
Max nTPM: 242.6
Min nTPM: 186.8
P10809_1012
198.8
P10809_1027
242.6
P10809_1046
193.1
P10809_1065
237.3
P10809_1111
186.8
Naive CD4 T-cell nTPM: 132.4
Samples: 6
Max nTPM: 157.9
Min nTPM: 109.6
P10809_1015
122.8
P10809_1030
134.3
P10809_1049
157.9
P10809_1068
131.6
P10809_1085
138.3
P10809_1112
109.6
Naive CD8 T-cell nTPM: 166.3
Samples: 6
Max nTPM: 213.4
Min nTPM: 116.3
P10809_1016
134.2
P10809_1031
213.4
P10809_1050
135.5
P10809_1069
185.2
P10809_1087
213.0
P10809_1110
116.3
T-reg nTPM: 374.6
Samples: 6
Max nTPM: 427.9
Min nTPM: 283.4
P10809_1018
368.2
P10809_1037
427.9
P10809_1056
283.4
P10809_1075
364.3
P10809_1094
381.4
P10809_1106
422.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 60.9
Samples: 4
Max nTPM: 87.7
Min nTPM: 33.6
RHH5202_R3573
33.6
RHH5230_R3602
40.7
RHH5259_R3631
87.7
RHH5288_R3660
81.7
Effector memory CD8 T-cell nTPM: 61.0
Samples: 4
Max nTPM: 79.3
Min nTPM: 47.4
RHH5203_R3574
67.8
RHH5231_R3603
47.4
RHH5260_R3632
79.3
RHH5289_R3661
49.6
MAIT T-cell nTPM: 51.0
Samples: 4
Max nTPM: 65.0
Min nTPM: 33.7
RHH5233_R3605
33.7
RHH5205_R3576
43.1
RHH5262_R3634
65.0
RHH5297_R3663
62.2
Memory CD4 T-cell TFH nTPM: 73.1
Samples: 4
Max nTPM: 100.7
Min nTPM: 48.6
RHH5300_R3666
72.0
RHH5236_R3608
100.7
RHH5265_R3637
71.2
RHH5208_R3579
48.6
Memory CD4 T-cell Th1 nTPM: 74.7
Samples: 4
Max nTPM: 96.9
Min nTPM: 34.0
RHH5210_R3581
34.0
RHH5302_R3668
96.9
RHH5238_R3610
91.7
RHH5267_R3639
76.0
Memory CD4 T-cell Th1/Th17 nTPM: 74.0
Samples: 4
Max nTPM: 88.0
Min nTPM: 50.1
RHH5303_R3669
88.0
RHH5211_R3582
72.6
RHH5239_R3611
50.1
RHH5268_R3640
85.3
Memory CD4 T-cell Th17 nTPM: 66.9
Samples: 4
Max nTPM: 80.1
Min nTPM: 54.9
RHH5304_R3670
54.9
RHH5212_R3583
65.0
RHH5240_R3612
67.5
RHH5269_R3641
80.1
Memory CD4 T-cell Th2 nTPM: 70.1
Samples: 4
Max nTPM: 88.2
Min nTPM: 58.7
RHH5305_R3671
88.2
RHH5213_R3584
59.9
RHH5241_R3613
58.7
RHH5270_R3642
73.4
Naive CD4 T-cell nTPM: 47.7
Samples: 4
Max nTPM: 59.7
Min nTPM: 27.1
RHH5306_R3672
59.7
RHH5214_R3585
54.5
RHH5242_R3614
27.1
RHH5271_R3643
49.4
Naive CD8 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 42.8
Min nTPM: 28.2
RHH5201_R3572
28.2
RHH5229_R3601
29.5
RHH5258_R3630
39.4
RHH5287_R3659
42.8
Non-Vd2 gdTCR nTPM: 82.4
Samples: 4
Max nTPM: 114.1
Min nTPM: 59.2
RHH5235_R3607
59.2
RHH5264_R3636
86.6
RHH5207_R3578
69.8
RHH5299_R3665
114.1
T-reg nTPM: 79.9
Samples: 4
Max nTPM: 103.9
Min nTPM: 69.0
RHH5301_R3667
103.9
RHH5237_R3609
69.0
RHH5266_R3638
73.5
RHH5209_R3580
73.0
Terminal effector memory CD4 T-cell nTPM: 67.6
Samples: 2
Max nTPM: 73.0
Min nTPM: 62.2
RHH5243_R3615
62.2
RHH5272_R3644
73.0
Terminal effector memory CD8 T-cell nTPM: 116.0
Samples: 4
Max nTPM: 212.9
Min nTPM: 55.3
RHH5232_R3604
55.3
RHH5204_R3575
212.9
RHH5261_R3633
103.9
RHH5296_R3662
91.8
Vd2 gdTCR nTPM: 104.9
Samples: 4
Max nTPM: 198.5
Min nTPM: 46.4
RHH5234_R3606
46.4
RHH5206_R3577
198.5
RHH5263_R3635
86.2
RHH5298_R3664
88.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
