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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
3821.5
nTPM
Monaco:
1906.8
nTPM
Schmiedel:
348.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
3821.5
HPA sample
nTPM
gdT-cell nTPM: 2289.8
Samples: 6
Max nTPM: 2621.4
Min nTPM: 1830.4
P10809_1007
2621.4
P10809_1022
2405.7
P10809_1041
2530.7
P10809_1060
1830.4
P10809_1077
2060.3
P10809_1098
2290.4
MAIT T-cell nTPM: 3821.5
Samples: 6
Max nTPM: 4534.1
Min nTPM: 3137.5
P10809_1006
3993.3
P10809_1024
4195.2
P10809_1043
3379.2
P10809_1062
3689.4
P10809_1083
3137.5
P10809_1097
4534.1
Memory CD4 T-cell nTPM: 3475.2
Samples: 6
Max nTPM: 4072.3
Min nTPM: 2694.1
P10809_1014
4072.3
P10809_1026
3880.7
P10809_1045
3852.1
P10809_1064
2900.4
P10809_1086
2694.1
P10809_1113
3451.3
Memory CD8 T-cell nTPM: 2972.0
Samples: 5
Max nTPM: 3526.5
Min nTPM: 2557.7
P10809_1012
3526.5
P10809_1027
2814.1
P10809_1046
2952.0
P10809_1065
2557.7
P10809_1111
3009.6
Naive CD4 T-cell nTPM: 3763.4
Samples: 6
Max nTPM: 4348.2
Min nTPM: 3035.8
P10809_1015
4348.2
P10809_1030
3805.5
P10809_1049
4312.7
P10809_1068
3725.5
P10809_1085
3035.8
P10809_1112
3352.6
Naive CD8 T-cell nTPM: 3261.4
Samples: 6
Max nTPM: 4478.4
Min nTPM: 2303.5
P10809_1016
4478.4
P10809_1031
3467.4
P10809_1050
3043.7
P10809_1069
3058.9
P10809_1087
2303.5
P10809_1110
3216.6
T-reg nTPM: 3036.1
Samples: 6
Max nTPM: 3464.5
Min nTPM: 2849.1
P10809_1018
2849.1
P10809_1037
2926.8
P10809_1056
2992.3
P10809_1075
2877.5
P10809_1094
3106.3
P10809_1106
3464.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1906.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 1438.7
Samples: 4
Max nTPM: 2086.6
Min nTPM: 1123.3
RHH5202_R3573
1338.7
RHH5230_R3602
1206.2
RHH5259_R3631
1123.3
RHH5288_R3660
2086.6
Effector memory CD8 T-cell nTPM: 845.6
Samples: 4
Max nTPM: 1077.4
Min nTPM: 682.4
RHH5203_R3574
842.7
RHH5231_R3603
1077.4
RHH5260_R3632
780.0
RHH5289_R3661
682.4
MAIT T-cell nTPM: 1462.3
Samples: 4
Max nTPM: 2188.9
Min nTPM: 939.2
RHH5233_R3605
1488.3
RHH5205_R3576
939.2
RHH5262_R3634
1232.8
RHH5297_R3663
2188.9
Memory CD4 T-cell TFH nTPM: 1906.8
Samples: 4
Max nTPM: 2777.7
Min nTPM: 1475.3
RHH5300_R3666
1661.2
RHH5236_R3608
2777.7
RHH5265_R3637
1475.3
RHH5208_R3579
1713.0
Memory CD4 T-cell Th1 nTPM: 1648.3
Samples: 4
Max nTPM: 2475.2
Min nTPM: 1119.5
RHH5210_R3581
1541.8
RHH5302_R3668
2475.2
RHH5238_R3610
1456.6
RHH5267_R3639
1119.5
Memory CD4 T-cell Th1/Th17 nTPM: 1686.3
Samples: 4
Max nTPM: 2498.7
Min nTPM: 992.4
RHH5303_R3669
2498.7
RHH5211_R3582
2014.5
RHH5239_R3611
992.4
RHH5268_R3640
1239.4
Memory CD4 T-cell Th17 nTPM: 1357.0
Samples: 4
Max nTPM: 2096.7
Min nTPM: 863.6
RHH5304_R3670
1420.2
RHH5212_R3583
2096.7
RHH5240_R3612
1047.4
RHH5269_R3641
863.6
Memory CD4 T-cell Th2 nTPM: 1627.8
Samples: 4
Max nTPM: 2379.9
Min nTPM: 1015.3
RHH5305_R3671
1637.2
RHH5213_R3584
1478.9
RHH5241_R3613
2379.9
RHH5270_R3642
1015.3
Naive CD4 T-cell nTPM: 1808.4
Samples: 4
Max nTPM: 2371.2
Min nTPM: 1197.7
RHH5306_R3672
1831.3
RHH5214_R3585
2371.2
RHH5242_R3614
1833.2
RHH5271_R3643
1197.7
Naive CD8 T-cell nTPM: 1703.4
Samples: 4
Max nTPM: 2199.0
Min nTPM: 1287.2
RHH5201_R3572
1711.5
RHH5229_R3601
1287.2
RHH5258_R3630
2199.0
RHH5287_R3659
1615.8
Non-Vd2 gdTCR nTPM: 988.7
Samples: 4
Max nTPM: 1284.1
Min nTPM: 720.1
RHH5235_R3607
750.1
RHH5264_R3636
1200.4
RHH5207_R3578
720.1
RHH5299_R3665
1284.1
T-reg nTPM: 1631.4
Samples: 4
Max nTPM: 2145.9
Min nTPM: 1005.5
RHH5301_R3667
2145.9
RHH5237_R3609
1957.4
RHH5266_R3638
1005.5
RHH5209_R3580
1416.7
Terminal effector memory CD4 T-cell nTPM: 1044.8
Samples: 2
Max nTPM: 1333.3
Min nTPM: 756.3
RHH5243_R3615
756.3
RHH5272_R3644
1333.3
Terminal effector memory CD8 T-cell nTPM: 1229.0
Samples: 4
Max nTPM: 1902.9
Min nTPM: 839.6
RHH5232_R3604
1004.9
RHH5204_R3575
1902.9
RHH5261_R3633
839.6
RHH5296_R3662
1168.4
Vd2 gdTCR nTPM: 1624.5
Samples: 4
Max nTPM: 2195.8
Min nTPM: 1063.4
RHH5234_R3606
1306.8
RHH5206_R3577
1932.1
RHH5263_R3635
1063.4
RHH5298_R3664
2195.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.