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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
370.4
nTPM
Monaco:
275.1
nTPM
Schmiedel:
210.0
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
370.4
HPA sample
nTPM
gdT-cell nTPM: 67.7
Samples: 6
Max nTPM: 104.6
Min nTPM: 40.8
P10809_1007
40.8
P10809_1022
76.4
P10809_1041
104.6
P10809_1060
44.8
P10809_1077
68.3
P10809_1098
71.4
MAIT T-cell nTPM: 186.7
Samples: 6
Max nTPM: 293.2
Min nTPM: 139.0
P10809_1006
139.0
P10809_1024
293.2
P10809_1043
188.4
P10809_1062
147.4
P10809_1083
180.5
P10809_1097
171.8
Memory CD4 T-cell nTPM: 208.2
Samples: 6
Max nTPM: 300.7
Min nTPM: 99.4
P10809_1014
144.2
P10809_1026
277.3
P10809_1045
300.7
P10809_1064
99.4
P10809_1086
193.4
P10809_1113
234.3
Memory CD8 T-cell nTPM: 157.7
Samples: 5
Max nTPM: 227.8
Min nTPM: 75.9
P10809_1012
136.8
P10809_1027
163.0
P10809_1046
185.1
P10809_1065
75.9
P10809_1111
227.8
Naive CD4 T-cell nTPM: 216.6
Samples: 6
Max nTPM: 390.5
Min nTPM: 126.7
P10809_1015
126.7
P10809_1030
208.5
P10809_1049
390.5
P10809_1068
158.2
P10809_1085
201.0
P10809_1112
214.6
Naive CD8 T-cell nTPM: 176.7
Samples: 6
Max nTPM: 227.5
Min nTPM: 112.9
P10809_1016
142.9
P10809_1031
205.4
P10809_1050
227.5
P10809_1069
112.9
P10809_1087
153.9
P10809_1110
217.8
T-reg nTPM: 370.3
Samples: 6
Max nTPM: 706.3
Min nTPM: 212.8
P10809_1018
212.8
P10809_1037
345.1
P10809_1056
706.3
P10809_1075
286.4
P10809_1094
304.2
P10809_1106
367.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
275.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 221.6
Samples: 4
Max nTPM: 292.4
Min nTPM: 117.6
RHH5202_R3573
292.4
RHH5230_R3602
254.3
RHH5259_R3631
117.6
RHH5288_R3660
222.2
Effector memory CD8 T-cell nTPM: 137.9
Samples: 4
Max nTPM: 250.1
Min nTPM: 86.8
RHH5203_R3574
250.1
RHH5231_R3603
86.8
RHH5260_R3632
106.8
RHH5289_R3661
107.7
MAIT T-cell nTPM: 184.4
Samples: 4
Max nTPM: 240.8
Min nTPM: 138.1
RHH5233_R3605
240.8
RHH5205_R3576
216.3
RHH5262_R3634
138.1
RHH5297_R3663
142.4
Memory CD4 T-cell TFH nTPM: 275.1
Samples: 4
Max nTPM: 324.2
Min nTPM: 221.2
RHH5300_R3666
247.0
RHH5236_R3608
324.2
RHH5265_R3637
221.2
RHH5208_R3579
308.1
Memory CD4 T-cell Th1 nTPM: 168.4
Samples: 4
Max nTPM: 217.5
Min nTPM: 118.9
RHH5210_R3581
217.5
RHH5302_R3668
178.7
RHH5238_R3610
158.6
RHH5267_R3639
118.9
Memory CD4 T-cell Th1/Th17 nTPM: 156.0
Samples: 4
Max nTPM: 239.3
Min nTPM: 110.7
RHH5303_R3669
156.2
RHH5211_R3582
239.3
RHH5239_R3611
117.9
RHH5268_R3640
110.7
Memory CD4 T-cell Th17 nTPM: 158.1
Samples: 4
Max nTPM: 203.6
Min nTPM: 117.6
RHH5304_R3670
161.4
RHH5212_R3583
149.7
RHH5240_R3612
203.6
RHH5269_R3641
117.6
Memory CD4 T-cell Th2 nTPM: 168.8
Samples: 4
Max nTPM: 216.3
Min nTPM: 115.6
RHH5305_R3671
147.9
RHH5213_R3584
195.4
RHH5241_R3613
216.3
RHH5270_R3642
115.6
Naive CD4 T-cell nTPM: 206.6
Samples: 4
Max nTPM: 250.6
Min nTPM: 183.2
RHH5306_R3672
183.2
RHH5214_R3585
250.6
RHH5242_R3614
203.6
RHH5271_R3643
189.1
Naive CD8 T-cell nTPM: 258.1
Samples: 4
Max nTPM: 330.2
Min nTPM: 182.2
RHH5201_R3572
330.2
RHH5229_R3601
182.2
RHH5258_R3630
245.9
RHH5287_R3659
274.2
Non-Vd2 gdTCR nTPM: 44.5
Samples: 4
Max nTPM: 60.6
Min nTPM: 29.4
RHH5235_R3607
60.6
RHH5264_R3636
48.9
RHH5207_R3578
29.4
RHH5299_R3665
39.2
T-reg nTPM: 213.2
Samples: 4
Max nTPM: 285.6
Min nTPM: 129.9
RHH5301_R3667
246.0
RHH5237_R3609
285.6
RHH5266_R3638
129.9
RHH5209_R3580
191.3
Terminal effector memory CD4 T-cell nTPM: 32.8
Samples: 2
Max nTPM: 60.8
Min nTPM: 4.7
RHH5243_R3615
4.7
RHH5272_R3644
60.8
Terminal effector memory CD8 T-cell nTPM: 41.7
Samples: 4
Max nTPM: 63.8
Min nTPM: 22.2
RHH5232_R3604
56.0
RHH5204_R3575
22.2
RHH5261_R3633
24.6
RHH5296_R3662
63.8
Vd2 gdTCR nTPM: 103.7
Samples: 4
Max nTPM: 142.4
Min nTPM: 45.1
RHH5234_R3606
142.4
RHH5206_R3577
45.1
RHH5263_R3635
95.0
RHH5298_R3664
132.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
