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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
86.3
nTPM
Monaco:
184.5
nTPM
Schmiedel:
102.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
86.3
HPA sample
nTPM
gdT-cell nTPM: 52.1
Samples: 6
Max nTPM: 68.2
Min nTPM: 43.2
P10809_1007
43.2
P10809_1022
68.2
P10809_1041
49.8
P10809_1060
53.1
P10809_1077
47.9
P10809_1098
50.6
MAIT T-cell nTPM: 66.3
Samples: 6
Max nTPM: 87.5
Min nTPM: 51.4
P10809_1006
63.7
P10809_1024
87.5
P10809_1043
63.7
P10809_1062
62.1
P10809_1083
51.4
P10809_1097
69.2
Memory CD4 T-cell nTPM: 60.9
Samples: 6
Max nTPM: 69.3
Min nTPM: 52.2
P10809_1014
54.4
P10809_1026
57.5
P10809_1045
69.3
P10809_1064
52.2
P10809_1086
65.2
P10809_1113
67.0
Memory CD8 T-cell nTPM: 66.3
Samples: 5
Max nTPM: 80.8
Min nTPM: 55.8
P10809_1012
64.2
P10809_1027
80.8
P10809_1046
70.6
P10809_1065
55.8
P10809_1111
60.1
Naive CD4 T-cell nTPM: 60.3
Samples: 6
Max nTPM: 70.1
Min nTPM: 49.5
P10809_1015
49.5
P10809_1030
62.1
P10809_1049
70.1
P10809_1068
59.1
P10809_1085
68.8
P10809_1112
52.2
Naive CD8 T-cell nTPM: 57.5
Samples: 6
Max nTPM: 62.1
Min nTPM: 46.3
P10809_1016
46.3
P10809_1031
61.0
P10809_1050
54.7
P10809_1069
60.0
P10809_1087
62.1
P10809_1110
61.1
T-reg nTPM: 86.3
Samples: 6
Max nTPM: 110.7
Min nTPM: 51.5
P10809_1018
86.5
P10809_1037
97.7
P10809_1056
51.5
P10809_1075
62.0
P10809_1094
109.2
P10809_1106
110.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
184.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.1
Samples: 4
Max nTPM: 168.3
Min nTPM: 120.4
RHH5202_R3573
159.2
RHH5230_R3602
168.3
RHH5259_R3631
132.3
RHH5288_R3660
120.4
Effector memory CD8 T-cell nTPM: 184.6
Samples: 4
Max nTPM: 209.6
Min nTPM: 163.3
RHH5203_R3574
209.6
RHH5231_R3603
173.7
RHH5260_R3632
163.3
RHH5289_R3661
191.7
MAIT T-cell nTPM: 132.9
Samples: 4
Max nTPM: 151.8
Min nTPM: 98.3
RHH5233_R3605
151.8
RHH5205_R3576
149.3
RHH5262_R3634
98.3
RHH5297_R3663
132.0
Memory CD4 T-cell TFH nTPM: 155.6
Samples: 4
Max nTPM: 180.7
Min nTPM: 142.1
RHH5300_R3666
142.1
RHH5236_R3608
180.7
RHH5265_R3637
142.2
RHH5208_R3579
157.5
Memory CD4 T-cell Th1 nTPM: 148.8
Samples: 4
Max nTPM: 187.3
Min nTPM: 129.5
RHH5210_R3581
132.7
RHH5302_R3668
145.5
RHH5238_R3610
187.3
RHH5267_R3639
129.5
Memory CD4 T-cell Th1/Th17 nTPM: 155.3
Samples: 4
Max nTPM: 195.6
Min nTPM: 121.1
RHH5303_R3669
167.7
RHH5211_R3582
195.6
RHH5239_R3611
136.6
RHH5268_R3640
121.1
Memory CD4 T-cell Th17 nTPM: 167.9
Samples: 4
Max nTPM: 197.3
Min nTPM: 137.7
RHH5304_R3670
171.1
RHH5212_R3583
137.7
RHH5240_R3612
197.3
RHH5269_R3641
165.4
Memory CD4 T-cell Th2 nTPM: 142.9
Samples: 4
Max nTPM: 164.2
Min nTPM: 124.3
RHH5305_R3671
127.3
RHH5213_R3584
164.2
RHH5241_R3613
155.8
RHH5270_R3642
124.3
Naive CD4 T-cell nTPM: 129.7
Samples: 4
Max nTPM: 132.5
Min nTPM: 125.9
RHH5306_R3672
132.5
RHH5214_R3585
128.0
RHH5242_R3614
125.9
RHH5271_R3643
132.2
Naive CD8 T-cell nTPM: 129.1
Samples: 4
Max nTPM: 131.8
Min nTPM: 123.6
RHH5201_R3572
131.8
RHH5229_R3601
130.0
RHH5258_R3630
123.6
RHH5287_R3659
130.9
Non-Vd2 gdTCR nTPM: 170.8
Samples: 4
Max nTPM: 211.9
Min nTPM: 146.1
RHH5235_R3607
211.9
RHH5264_R3636
151.9
RHH5207_R3578
173.1
RHH5299_R3665
146.1
T-reg nTPM: 135.5
Samples: 4
Max nTPM: 147.9
Min nTPM: 109.8
RHH5301_R3667
109.8
RHH5237_R3609
147.9
RHH5266_R3638
139.5
RHH5209_R3580
144.6
Terminal effector memory CD4 T-cell nTPM: 164.3
Samples: 2
Max nTPM: 189.2
Min nTPM: 139.4
RHH5243_R3615
189.2
RHH5272_R3644
139.4
Terminal effector memory CD8 T-cell nTPM: 157.4
Samples: 4
Max nTPM: 172.9
Min nTPM: 134.8
RHH5232_R3604
172.9
RHH5204_R3575
134.8
RHH5261_R3633
165.8
RHH5296_R3662
155.9
Vd2 gdTCR nTPM: 145.0
Samples: 4
Max nTPM: 171.0
Min nTPM: 133.6
RHH5234_R3606
171.0
RHH5206_R3577
133.6
RHH5263_R3635
140.3
RHH5298_R3664
135.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
