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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
166.6
nTPM
Monaco:
378.4
nTPM
Schmiedel:
120.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.6
HPA sample
nTPM
gdT-cell nTPM: 136.8
Samples: 6
Max nTPM: 188.0
Min nTPM: 97.9
P10809_1007
97.9
P10809_1022
145.2
P10809_1041
188.0
P10809_1060
99.8
P10809_1077
149.7
P10809_1098
139.9
MAIT T-cell nTPM: 166.6
Samples: 6
Max nTPM: 209.3
Min nTPM: 118.9
P10809_1006
124.2
P10809_1024
209.3
P10809_1043
180.6
P10809_1062
118.9
P10809_1083
194.5
P10809_1097
171.9
Memory CD4 T-cell nTPM: 146.2
Samples: 6
Max nTPM: 190.6
Min nTPM: 115.8
P10809_1014
120.2
P10809_1026
137.7
P10809_1045
164.3
P10809_1064
115.8
P10809_1086
190.6
P10809_1113
148.8
Memory CD8 T-cell nTPM: 145.3
Samples: 5
Max nTPM: 174.9
Min nTPM: 113.1
P10809_1012
113.1
P10809_1027
157.1
P10809_1046
160.0
P10809_1065
121.3
P10809_1111
174.9
Naive CD4 T-cell nTPM: 151.2
Samples: 6
Max nTPM: 210.1
Min nTPM: 115.9
P10809_1015
121.3
P10809_1030
151.4
P10809_1049
210.1
P10809_1068
115.9
P10809_1085
160.6
P10809_1112
148.1
Naive CD8 T-cell nTPM: 149.0
Samples: 6
Max nTPM: 183.7
Min nTPM: 122.7
P10809_1016
122.7
P10809_1031
130.3
P10809_1050
160.2
P10809_1069
144.6
P10809_1087
183.7
P10809_1110
152.2
T-reg nTPM: 148.0
Samples: 6
Max nTPM: 184.8
Min nTPM: 106.3
P10809_1018
106.3
P10809_1037
133.5
P10809_1056
184.8
P10809_1075
140.3
P10809_1094
143.3
P10809_1106
179.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
378.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 291.2
Samples: 4
Max nTPM: 353.0
Min nTPM: 182.7
RHH5202_R3573
353.0
RHH5230_R3602
308.8
RHH5259_R3631
182.7
RHH5288_R3660
320.2
Effector memory CD8 T-cell nTPM: 341.2
Samples: 4
Max nTPM: 396.0
Min nTPM: 225.1
RHH5203_R3574
387.8
RHH5231_R3603
355.7
RHH5260_R3632
225.1
RHH5289_R3661
396.0
MAIT T-cell nTPM: 378.4
Samples: 4
Max nTPM: 469.1
Min nTPM: 337.9
RHH5233_R3605
469.1
RHH5205_R3576
339.2
RHH5262_R3634
367.4
RHH5297_R3663
337.9
Memory CD4 T-cell TFH nTPM: 311.7
Samples: 4
Max nTPM: 334.9
Min nTPM: 278.8
RHH5300_R3666
302.1
RHH5236_R3608
334.9
RHH5265_R3637
278.8
RHH5208_R3579
330.8
Memory CD4 T-cell Th1 nTPM: 264.9
Samples: 4
Max nTPM: 356.0
Min nTPM: 162.8
RHH5210_R3581
292.5
RHH5302_R3668
356.0
RHH5238_R3610
162.8
RHH5267_R3639
248.1
Memory CD4 T-cell Th1/Th17 nTPM: 286.0
Samples: 4
Max nTPM: 396.7
Min nTPM: 168.5
RHH5303_R3669
396.7
RHH5211_R3582
353.1
RHH5239_R3611
168.5
RHH5268_R3640
225.7
Memory CD4 T-cell Th17 nTPM: 270.9
Samples: 4
Max nTPM: 325.9
Min nTPM: 206.2
RHH5304_R3670
325.9
RHH5212_R3583
321.3
RHH5240_R3612
230.0
RHH5269_R3641
206.2
Memory CD4 T-cell Th2 nTPM: 332.0
Samples: 4
Max nTPM: 354.0
Min nTPM: 299.5
RHH5305_R3671
320.8
RHH5213_R3584
353.8
RHH5241_R3613
354.0
RHH5270_R3642
299.5
Naive CD4 T-cell nTPM: 295.7
Samples: 4
Max nTPM: 354.9
Min nTPM: 270.5
RHH5306_R3672
354.9
RHH5214_R3585
281.4
RHH5242_R3614
270.5
RHH5271_R3643
276.0
Naive CD8 T-cell nTPM: 320.2
Samples: 4
Max nTPM: 436.7
Min nTPM: 171.3
RHH5201_R3572
436.7
RHH5229_R3601
171.3
RHH5258_R3630
347.9
RHH5287_R3659
324.7
Non-Vd2 gdTCR nTPM: 362.8
Samples: 4
Max nTPM: 437.4
Min nTPM: 278.8
RHH5235_R3607
278.8
RHH5264_R3636
437.4
RHH5207_R3578
380.8
RHH5299_R3665
354.2
T-reg nTPM: 264.4
Samples: 4
Max nTPM: 341.6
Min nTPM: 224.2
RHH5301_R3667
253.9
RHH5237_R3609
341.6
RHH5266_R3638
224.2
RHH5209_R3580
237.8
Terminal effector memory CD4 T-cell nTPM: 326.4
Samples: 2
Max nTPM: 366.9
Min nTPM: 285.9
RHH5243_R3615
285.9
RHH5272_R3644
366.9
Terminal effector memory CD8 T-cell nTPM: 359.2
Samples: 4
Max nTPM: 429.0
Min nTPM: 266.0
RHH5232_R3604
429.0
RHH5204_R3575
343.7
RHH5261_R3633
266.0
RHH5296_R3662
397.9
Vd2 gdTCR nTPM: 362.5
Samples: 4
Max nTPM: 401.0
Min nTPM: 304.9
RHH5234_R3606
379.3
RHH5206_R3577
401.0
RHH5263_R3635
304.9
RHH5298_R3664
364.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.