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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.0
nTPM
Monaco:
101.8
nTPM
Schmiedel:
42.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.0
HPA sample
nTPM
gdT-cell nTPM: 26.6
Samples: 6
Max nTPM: 38.2
Min nTPM: 18.7
P10809_1007
18.7
P10809_1022
25.4
P10809_1041
20.2
P10809_1060
38.2
P10809_1077
31.1
P10809_1098
26.0
MAIT T-cell nTPM: 25.4
Samples: 6
Max nTPM: 41.6
Min nTPM: 11.1
P10809_1006
17.6
P10809_1024
28.9
P10809_1043
27.5
P10809_1062
41.6
P10809_1083
25.7
P10809_1097
11.1
Memory CD4 T-cell nTPM: 36.4
Samples: 6
Max nTPM: 47.6
Min nTPM: 24.9
P10809_1014
24.9
P10809_1026
47.6
P10809_1045
30.1
P10809_1064
47.0
P10809_1086
31.5
P10809_1113
37.2
Memory CD8 T-cell nTPM: 34.3
Samples: 5
Max nTPM: 70.2
Min nTPM: 19.7
P10809_1012
19.7
P10809_1027
70.2
P10809_1046
22.4
P10809_1065
34.3
P10809_1111
25.0
Naive CD4 T-cell nTPM: 14.4
Samples: 6
Max nTPM: 22.2
Min nTPM: 8.3
P10809_1015
8.3
P10809_1030
12.2
P10809_1049
13.6
P10809_1068
22.2
P10809_1085
17.5
P10809_1112
12.3
Naive CD8 T-cell nTPM: 18.9
Samples: 6
Max nTPM: 30.8
Min nTPM: 6.1
P10809_1016
6.1
P10809_1031
25.3
P10809_1050
13.5
P10809_1069
30.8
P10809_1087
22.5
P10809_1110
15.0
T-reg nTPM: 109.0
Samples: 6
Max nTPM: 122.6
Min nTPM: 90.6
P10809_1018
90.6
P10809_1037
122.6
P10809_1056
105.2
P10809_1075
114.2
P10809_1094
116.4
P10809_1106
105.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
101.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 41.4
Samples: 4
Max nTPM: 75.6
Min nTPM: 12.3
RHH5202_R3573
75.6
RHH5230_R3602
12.3
RHH5259_R3631
29.1
RHH5288_R3660
48.4
Effector memory CD8 T-cell nTPM: 79.8
Samples: 4
Max nTPM: 145.4
Min nTPM: 32.0
RHH5203_R3574
145.4
RHH5231_R3603
32.0
RHH5260_R3632
67.5
RHH5289_R3661
74.4
MAIT T-cell nTPM: 48.4
Samples: 4
Max nTPM: 95.8
Min nTPM: 19.1
RHH5233_R3605
19.1
RHH5205_R3576
95.8
RHH5262_R3634
34.2
RHH5297_R3663
44.3
Memory CD4 T-cell TFH nTPM: 79.5
Samples: 4
Max nTPM: 176.1
Min nTPM: 30.0
RHH5300_R3666
60.5
RHH5236_R3608
30.0
RHH5265_R3637
51.3
RHH5208_R3579
176.1
Memory CD4 T-cell Th1 nTPM: 62.1
Samples: 4
Max nTPM: 105.9
Min nTPM: 28.8
RHH5210_R3581
105.9
RHH5302_R3668
59.8
RHH5238_R3610
28.8
RHH5267_R3639
53.7
Memory CD4 T-cell Th1/Th17 nTPM: 61.1
Samples: 4
Max nTPM: 101.8
Min nTPM: 24.7
RHH5303_R3669
78.8
RHH5211_R3582
101.8
RHH5239_R3611
24.7
RHH5268_R3640
39.0
Memory CD4 T-cell Th17 nTPM: 79.5
Samples: 4
Max nTPM: 180.2
Min nTPM: 17.7
RHH5304_R3670
61.9
RHH5212_R3583
180.2
RHH5240_R3612
17.7
RHH5269_R3641
58.3
Memory CD4 T-cell Th2 nTPM: 89.8
Samples: 4
Max nTPM: 203.8
Min nTPM: 27.2
RHH5305_R3671
58.2
RHH5213_R3584
203.8
RHH5241_R3613
27.2
RHH5270_R3642
70.0
Naive CD4 T-cell nTPM: 36.1
Samples: 4
Max nTPM: 73.0
Min nTPM: 8.2
RHH5306_R3672
31.8
RHH5214_R3585
73.0
RHH5242_R3614
8.2
RHH5271_R3643
31.2
Naive CD8 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 44.4
Min nTPM: 8.6
RHH5201_R3572
44.4
RHH5229_R3601
8.6
RHH5258_R3630
17.6
RHH5287_R3659
11.9
Non-Vd2 gdTCR nTPM: 67.0
Samples: 4
Max nTPM: 118.6
Min nTPM: 34.2
RHH5235_R3607
36.8
RHH5264_R3636
78.5
RHH5207_R3578
118.6
RHH5299_R3665
34.2
T-reg nTPM: 101.8
Samples: 4
Max nTPM: 166.4
Min nTPM: 46.0
RHH5301_R3667
103.4
RHH5237_R3609
46.0
RHH5266_R3638
91.4
RHH5209_R3580
166.4
Terminal effector memory CD4 T-cell nTPM: 38.1
Samples: 2
Max nTPM: 53.0
Min nTPM: 23.2
RHH5243_R3615
23.2
RHH5272_R3644
53.0
Terminal effector memory CD8 T-cell nTPM: 58.4
Samples: 4
Max nTPM: 95.3
Min nTPM: 31.5
RHH5232_R3604
31.5
RHH5204_R3575
95.3
RHH5261_R3633
61.1
RHH5296_R3662
45.6
Vd2 gdTCR nTPM: 49.5
Samples: 4
Max nTPM: 96.5
Min nTPM: 25.9
RHH5234_R3606
25.9
RHH5206_R3577
96.5
RHH5263_R3635
38.0
RHH5298_R3664
37.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
