HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:7.4 nTPM
HPA Brain:22.3 nTPM
GTEx:7.4 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:12.4 nTPM
Mouse:10.5 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018799Antibody HPA019648Antibody HPA024367
Glial cells Not detectedNot detectedLow
Neuronal cells LowMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.3
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
2529 Female, age 94, left hemisphere 22.5
2148 Female, age 91, left hemisphere 22.2
1898 Male, age 80, left hemisphere 21.5
2621 Female, age 67, right hemisphere 21.4
1911 Female, age 85, right hemisphere 21.2
1855 Male, age 76, left hemisphere 20.8
Dentate gyrus
nTPM: 21.5
2528 Male, age 74, both hemispheres 23.1
2010 Male, age 76, both hemispheres 22.8
2530 Female, age 94, left hemisphere 22.4
2531 Female, age 67, both hemispheres 20.6
1927 Female, age 91, both hemispheres 20.3
2246 Female, age 85, both hemispheres 20.1
Entorhinal gyrus
nTPM: 22.3
2117 Female, age 91, right hemisphere 23.8
2764 Male, age 80, right hemisphere 23.4
2613 Female, age 94, left hemisphere 21.9
2686 Male, age 75, right hemisphere 21.9
1787 Male, age 76, left hemisphere 21.8
1938 Female, age 85, left hemisphere 20.9
Hippocampus, CA1
nTPM: 21.4
2749 Male, age 80, left hemisphere 22.2
1873 Female, age 85, both hemispheres 21.9
2082 Female, age 91, right hemisphere 21.1
2045 Male, age 76, both hemispheres 20.9
2527 Male, age 74, both hemispheres 20.9
Hippocampus, CA2
nTPM: 21.5
1963 Male, age 80, left hemisphere 24.8
2437 Female, age 94, left hemisphere 21.6
1892 Male, age 76, both hemispheres 21.0
2113 Female, age 91, right hemisphere 21.0
1940 Female, age 85, left hemisphere 20.5
2249 Male, age 74, both hemispheres 20.5
Hippocampus, CA3
nTPM: 21.6
1867 Male, age 76, both hemispheres 22.6
2436 Male, age 74, both hemispheres 22.4
1891 Female, age 85, both hemispheres 22.3
2861 Female, age 67, both hemispheres 21.2
2620 Female, age 94, left hemisphere 20.7
2137 Male, age 80, left hemisphere 20.4
Parahippocampal cortex
nTPM: 20.2
2692 Male, age 74, both hemispheres 22.3
1990 Female, age 91, right hemisphere 21.6
2018 Male, age 76, both hemispheres 21.1
1850 Male, age 80, both hemispheres 20.5
2622 Female, age 67, right hemisphere 20.4
2532 Female, age 72, left hemisphere 19.8
1933 Female, age 85, both hemispheres 19.5
2250 Female, age 67, right hemisphere 19.2
2245 Female, age 91, both hemispheres 19.1
2693 Female, age 94, both hemispheres 18.3
Perirhinal gyrus
nTPM: 19.4
1847 Female, age 91, left hemisphere 20.4
1794 Male, age 80, right hemisphere 19.6
2521 Female, age 94, right hemisphere 19.3
1841 Female, age 85, right hemisphere 19.1
2848 Male, age 76, right hemisphere 18.6
Subiculum
nTPM: 22.2
2042 Male, age 76, both hemispheres 23.3
2619 Male, age 74, both hemispheres 22.9
2729 Female, age 91, right hemisphere 22.5
1977 Female, age 85, both hemispheres 21.9
1901 Male, age 80, both hemispheres 21.4
2438 Female, age 94, left hemisphere 21.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.4
Samples: 197

Max nTPM: 12.0
Min nTPM: 3.6
Std nTPM: 1.5
Median nTPM: 7.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 11.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 11.3
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 11.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 11.0
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 10.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 10.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 10.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 10.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 10.8
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 10.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10153-102I9 76 years, female 16.6
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.4
Pig sample Sample description nTPM
Subiculum
nTPM: 12.0
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.9
Sample A Female 14.5
Sample B Female 11.2
Sample C Male 12.4
Sample D Male 9.9
Dorsal hippocampus
nTPM: 12.4
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.6
Sample A Female 14.1
Sample B Female 13.1
Sample C Male 12.7
Sample D Male 9.6
Entorhinal cortex
nTPM: 11.0
Samples: 4

Max nTPM: 11.9
Min nTPM: 9.8
Sample A Female 11.9
Sample B Female 11.0
Sample C Male 11.2
Sample D Male 9.8
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.2
Sample A Female 12.0
Sample B Female 9.2
Sample C Male 15.9
Sample D Male 12.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 13.3
Min nTPM: 9.4
Sample A Male 9.7
Sample B Male 9.4
Sample C Female 9.8
Sample D Female 13.3
Hippocampal formation
nTPM: 10.3
Samples: 4

Max nTPM: 12.1
Min nTPM: 7.2
Sample A Male 7.2
Sample B Male 11.8
Sample C Female 12.1
Sample D Female 10.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
69672838 Antisense, RP_050428_04_E11, Mouse strain C57BL/6J (56 days, male) 15.8

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