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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
4006.9
nTPM
Monaco:
2969.4
nTPM
Schmiedel:
973.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
4006.9
HPA sample
nTPM
gdT-cell nTPM: 1754.7
Samples: 6
Max nTPM: 2399.0
Min nTPM: 1235.9
P10809_1007
1940.8
P10809_1022
1980.7
P10809_1041
2399.0
P10809_1060
1235.9
P10809_1077
1437.4
P10809_1098
1534.4
MAIT T-cell nTPM: 4006.9
Samples: 6
Max nTPM: 4657.2
Min nTPM: 3184.2
P10809_1006
3985.9
P10809_1024
4657.2
P10809_1043
4035.9
P10809_1062
3868.7
P10809_1083
3184.2
P10809_1097
4309.3
Memory CD4 T-cell nTPM: 3180.9
Samples: 6
Max nTPM: 3893.8
Min nTPM: 2254.2
P10809_1014
3861.0
P10809_1026
3893.8
P10809_1045
3595.6
P10809_1064
2254.2
P10809_1086
2309.3
P10809_1113
3171.7
Memory CD8 T-cell nTPM: 2361.6
Samples: 5
Max nTPM: 2933.6
Min nTPM: 1820.1
P10809_1012
2933.6
P10809_1027
2241.8
P10809_1046
2687.3
P10809_1065
1820.1
P10809_1111
2125.1
Naive CD4 T-cell nTPM: 3265.1
Samples: 6
Max nTPM: 3746.9
Min nTPM: 2636.6
P10809_1015
3564.2
P10809_1030
3377.8
P10809_1049
3746.9
P10809_1068
3312.2
P10809_1085
2636.6
P10809_1112
2953.0
Naive CD8 T-cell nTPM: 2737.0
Samples: 6
Max nTPM: 4187.3
Min nTPM: 1573.9
P10809_1016
4187.3
P10809_1031
2931.8
P10809_1050
2473.6
P10809_1069
2528.9
P10809_1087
1573.9
P10809_1110
2726.6
T-reg nTPM: 2349.1
Samples: 6
Max nTPM: 2520.7
Min nTPM: 2180.8
P10809_1018
2289.3
P10809_1037
2493.9
P10809_1056
2520.7
P10809_1075
2180.8
P10809_1094
2402.6
P10809_1106
2207.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2969.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 2285.0
Samples: 4
Max nTPM: 2783.7
Min nTPM: 1224.8
RHH5202_R3573
2783.7
RHH5230_R3602
2367.6
RHH5259_R3631
1224.8
RHH5288_R3660
2763.7
Effector memory CD8 T-cell nTPM: 1271.6
Samples: 4
Max nTPM: 1763.0
Min nTPM: 880.6
RHH5203_R3574
1539.9
RHH5231_R3603
1763.0
RHH5260_R3632
880.6
RHH5289_R3661
902.8
MAIT T-cell nTPM: 2581.0
Samples: 4
Max nTPM: 3583.5
Min nTPM: 1644.0
RHH5233_R3605
3135.0
RHH5205_R3576
1644.0
RHH5262_R3634
1961.4
RHH5297_R3663
3583.5
Memory CD4 T-cell TFH nTPM: 2679.9
Samples: 4
Max nTPM: 3396.6
Min nTPM: 1894.5
RHH5300_R3666
2669.3
RHH5236_R3608
3396.6
RHH5265_R3637
1894.5
RHH5208_R3579
2759.3
Memory CD4 T-cell Th1 nTPM: 2235.6
Samples: 4
Max nTPM: 3244.9
Min nTPM: 1323.5
RHH5210_R3581
2827.1
RHH5302_R3668
3244.9
RHH5238_R3610
1546.7
RHH5267_R3639
1323.5
Memory CD4 T-cell Th1/Th17 nTPM: 2969.4
Samples: 4
Max nTPM: 4464.6
Min nTPM: 1356.2
RHH5303_R3669
4301.9
RHH5211_R3582
4464.6
RHH5239_R3611
1356.2
RHH5268_R3640
1754.9
Memory CD4 T-cell Th17 nTPM: 2371.3
Samples: 4
Max nTPM: 4026.9
Min nTPM: 1304.3
RHH5304_R3670
2544.5
RHH5212_R3583
4026.9
RHH5240_R3612
1609.4
RHH5269_R3641
1304.3
Memory CD4 T-cell Th2 nTPM: 2619.0
Samples: 4
Max nTPM: 3295.9
Min nTPM: 1654.3
RHH5305_R3671
2690.2
RHH5213_R3584
2835.4
RHH5241_R3613
3295.9
RHH5270_R3642
1654.3
Naive CD4 T-cell nTPM: 2533.3
Samples: 4
Max nTPM: 3459.5
Min nTPM: 1518.0
RHH5306_R3672
2856.1
RHH5214_R3585
3459.5
RHH5242_R3614
2299.4
RHH5271_R3643
1518.0
Naive CD8 T-cell nTPM: 2479.8
Samples: 4
Max nTPM: 3251.2
Min nTPM: 1355.5
RHH5201_R3572
3016.3
RHH5229_R3601
1355.5
RHH5258_R3630
3251.2
RHH5287_R3659
2296.1
Non-Vd2 gdTCR nTPM: 1062.8
Samples: 4
Max nTPM: 1325.6
Min nTPM: 827.0
RHH5235_R3607
827.0
RHH5264_R3636
1259.5
RHH5207_R3578
839.2
RHH5299_R3665
1325.6
T-reg nTPM: 2115.8
Samples: 4
Max nTPM: 2745.3
Min nTPM: 1143.9
RHH5301_R3667
2745.3
RHH5237_R3609
2668.3
RHH5266_R3638
1143.9
RHH5209_R3580
1905.5
Terminal effector memory CD4 T-cell nTPM: 1154.7
Samples: 2
Max nTPM: 1570.0
Min nTPM: 739.4
RHH5243_R3615
739.4
RHH5272_R3644
1570.0
Terminal effector memory CD8 T-cell nTPM: 1293.4
Samples: 4
Max nTPM: 1572.7
Min nTPM: 754.0
RHH5232_R3604
1455.3
RHH5204_R3575
1572.7
RHH5261_R3633
754.0
RHH5296_R3662
1391.5
Vd2 gdTCR nTPM: 2109.0
Samples: 4
Max nTPM: 2588.6
Min nTPM: 1276.6
RHH5234_R3606
2095.2
RHH5206_R3577
2475.7
RHH5263_R3635
1276.6
RHH5298_R3664
2588.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.