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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
84.6
nTPM
Monaco:
267.9
nTPM
Schmiedel:
174.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
84.6
HPA sample
nTPM
gdT-cell nTPM: 84.6
Samples: 6
Max nTPM: 101.6
Min nTPM: 63.7
P10809_1007
101.6
P10809_1022
93.3
P10809_1041
80.7
P10809_1060
70.8
P10809_1077
63.7
P10809_1098
97.5
MAIT T-cell nTPM: 45.4
Samples: 6
Max nTPM: 57.1
Min nTPM: 39.2
P10809_1006
57.1
P10809_1024
39.2
P10809_1043
39.7
P10809_1062
44.3
P10809_1083
44.5
P10809_1097
47.4
Memory CD4 T-cell nTPM: 38.5
Samples: 6
Max nTPM: 43.8
Min nTPM: 30.9
P10809_1014
43.8
P10809_1026
30.9
P10809_1045
33.5
P10809_1064
42.6
P10809_1086
39.6
P10809_1113
40.6
Memory CD8 T-cell nTPM: 56.0
Samples: 5
Max nTPM: 65.4
Min nTPM: 45.3
P10809_1012
65.4
P10809_1027
45.3
P10809_1046
53.9
P10809_1065
58.2
P10809_1111
57.1
Naive CD4 T-cell nTPM: 29.6
Samples: 6
Max nTPM: 40.0
Min nTPM: 12.9
P10809_1015
36.8
P10809_1030
22.4
P10809_1049
12.9
P10809_1068
29.0
P10809_1085
40.0
P10809_1112
36.6
Naive CD8 T-cell nTPM: 40.4
Samples: 6
Max nTPM: 54.5
Min nTPM: 31.0
P10809_1016
32.5
P10809_1031
31.0
P10809_1050
39.8
P10809_1069
46.2
P10809_1087
54.5
P10809_1110
38.6
T-reg nTPM: 31.5
Samples: 6
Max nTPM: 52.8
Min nTPM: 16.0
P10809_1018
52.8
P10809_1037
28.6
P10809_1056
16.0
P10809_1075
27.7
P10809_1094
33.9
P10809_1106
30.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
267.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 130.7
Samples: 4
Max nTPM: 174.2
Min nTPM: 111.8
RHH5202_R3573
111.8
RHH5230_R3602
116.7
RHH5259_R3631
174.2
RHH5288_R3660
120.0
Effector memory CD8 T-cell nTPM: 248.4
Samples: 4
Max nTPM: 270.9
Min nTPM: 209.3
RHH5203_R3574
209.3
RHH5231_R3603
246.0
RHH5260_R3632
270.9
RHH5289_R3661
267.5
MAIT T-cell nTPM: 154.3
Samples: 4
Max nTPM: 188.1
Min nTPM: 133.9
RHH5233_R3605
136.8
RHH5205_R3576
188.1
RHH5262_R3634
158.5
RHH5297_R3663
133.9
Memory CD4 T-cell TFH nTPM: 129.1
Samples: 4
Max nTPM: 140.0
Min nTPM: 117.2
RHH5300_R3666
122.1
RHH5236_R3608
140.0
RHH5265_R3637
117.2
RHH5208_R3579
137.0
Memory CD4 T-cell Th1 nTPM: 149.9
Samples: 4
Max nTPM: 185.2
Min nTPM: 127.6
RHH5210_R3581
140.5
RHH5302_R3668
127.6
RHH5238_R3610
185.2
RHH5267_R3639
146.1
Memory CD4 T-cell Th1/Th17 nTPM: 152.4
Samples: 4
Max nTPM: 179.7
Min nTPM: 141.9
RHH5303_R3669
142.6
RHH5211_R3582
179.7
RHH5239_R3611
145.2
RHH5268_R3640
141.9
Memory CD4 T-cell Th17 nTPM: 168.2
Samples: 4
Max nTPM: 186.9
Min nTPM: 151.6
RHH5304_R3670
159.9
RHH5212_R3583
174.5
RHH5240_R3612
186.9
RHH5269_R3641
151.6
Memory CD4 T-cell Th2 nTPM: 152.4
Samples: 4
Max nTPM: 168.3
Min nTPM: 144.8
RHH5305_R3671
144.8
RHH5213_R3584
168.3
RHH5241_R3613
149.5
RHH5270_R3642
147.0
Naive CD4 T-cell nTPM: 121.8
Samples: 4
Max nTPM: 129.6
Min nTPM: 110.7
RHH5306_R3672
110.7
RHH5214_R3585
129.6
RHH5242_R3614
120.7
RHH5271_R3643
126.0
Naive CD8 T-cell nTPM: 102.7
Samples: 4
Max nTPM: 115.3
Min nTPM: 85.8
RHH5201_R3572
85.8
RHH5229_R3601
110.0
RHH5258_R3630
99.5
RHH5287_R3659
115.3
Non-Vd2 gdTCR nTPM: 267.9
Samples: 4
Max nTPM: 334.5
Min nTPM: 219.5
RHH5235_R3607
294.8
RHH5264_R3636
222.7
RHH5207_R3578
334.5
RHH5299_R3665
219.5
T-reg nTPM: 130.6
Samples: 4
Max nTPM: 149.3
Min nTPM: 105.7
RHH5301_R3667
105.7
RHH5237_R3609
149.3
RHH5266_R3638
122.0
RHH5209_R3580
145.2
Terminal effector memory CD4 T-cell nTPM: 263.6
Samples: 2
Max nTPM: 315.9
Min nTPM: 211.2
RHH5243_R3615
315.9
RHH5272_R3644
211.2
Terminal effector memory CD8 T-cell nTPM: 265.0
Samples: 4
Max nTPM: 332.2
Min nTPM: 209.9
RHH5232_R3604
251.6
RHH5204_R3575
209.9
RHH5261_R3633
332.2
RHH5296_R3662
266.1
Vd2 gdTCR nTPM: 238.9
Samples: 4
Max nTPM: 292.6
Min nTPM: 165.5
RHH5234_R3606
213.1
RHH5206_R3577
284.4
RHH5263_R3635
292.6
RHH5298_R3664
165.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
