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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.5
nTPM
Monaco:
25.7
nTPM
Schmiedel:
115.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.5
HPA sample
nTPM
gdT-cell nTPM: 9.2
Samples: 6
Max nTPM: 13.1
Min nTPM: 5.2
P10809_1007
7.5
P10809_1022
11.3
P10809_1041
11.1
P10809_1060
5.2
P10809_1077
6.8
P10809_1098
13.1
MAIT T-cell nTPM: 10.9
Samples: 6
Max nTPM: 14.2
Min nTPM: 7.4
P10809_1006
12.5
P10809_1024
14.2
P10809_1043
10.8
P10809_1062
9.9
P10809_1083
7.4
P10809_1097
10.3
Memory CD4 T-cell nTPM: 9.9
Samples: 6
Max nTPM: 12.3
Min nTPM: 6.5
P10809_1014
7.3
P10809_1026
10.7
P10809_1045
12.3
P10809_1064
6.5
P10809_1086
11.0
P10809_1113
11.8
Memory CD8 T-cell nTPM: 11.5
Samples: 5
Max nTPM: 18.7
Min nTPM: 7.6
P10809_1012
7.6
P10809_1027
18.7
P10809_1046
8.1
P10809_1065
10.2
P10809_1111
12.8
Naive CD4 T-cell nTPM: 10.1
Samples: 6
Max nTPM: 16.3
Min nTPM: 7.4
P10809_1015
7.8
P10809_1030
10.7
P10809_1049
16.3
P10809_1068
7.4
P10809_1085
8.4
P10809_1112
10.1
Naive CD8 T-cell nTPM: 11.2
Samples: 6
Max nTPM: 14.2
Min nTPM: 6.5
P10809_1016
6.5
P10809_1031
13.4
P10809_1050
12.0
P10809_1069
10.0
P10809_1087
10.9
P10809_1110
14.2
T-reg nTPM: 12.5
Samples: 6
Max nTPM: 17.5
Min nTPM: 8.0
P10809_1018
11.8
P10809_1037
16.9
P10809_1056
11.8
P10809_1075
8.0
P10809_1094
8.8
P10809_1106
17.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 15.9
Min nTPM: 12.2
RHH5202_R3573
12.8
RHH5230_R3602
12.2
RHH5259_R3631
15.9
RHH5288_R3660
13.8
Effector memory CD8 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 30.7
Min nTPM: 8.0
RHH5203_R3574
8.0
RHH5231_R3603
23.8
RHH5260_R3632
20.6
RHH5289_R3661
30.7
MAIT T-cell nTPM: 18.5
Samples: 4
Max nTPM: 24.4
Min nTPM: 15.2
RHH5233_R3605
15.2
RHH5205_R3576
17.0
RHH5262_R3634
24.4
RHH5297_R3663
17.5
Memory CD4 T-cell TFH nTPM: 14.0
Samples: 4
Max nTPM: 22.3
Min nTPM: 3.5
RHH5300_R3666
12.1
RHH5236_R3608
18.2
RHH5265_R3637
22.3
RHH5208_R3579
3.5
Memory CD4 T-cell Th1 nTPM: 11.9
Samples: 4
Max nTPM: 14.3
Min nTPM: 10.3
RHH5210_R3581
12.0
RHH5302_R3668
10.3
RHH5238_R3610
10.8
RHH5267_R3639
14.3
Memory CD4 T-cell Th1/Th17 nTPM: 11.3
Samples: 4
Max nTPM: 13.4
Min nTPM: 9.0
RHH5303_R3669
13.0
RHH5211_R3582
13.4
RHH5239_R3611
9.0
RHH5268_R3640
9.7
Memory CD4 T-cell Th17 nTPM: 17.0
Samples: 4
Max nTPM: 22.4
Min nTPM: 11.1
RHH5304_R3670
15.3
RHH5212_R3583
11.1
RHH5240_R3612
22.4
RHH5269_R3641
19.2
Memory CD4 T-cell Th2 nTPM: 25.7
Samples: 4
Max nTPM: 38.8
Min nTPM: 20.1
RHH5305_R3671
21.5
RHH5213_R3584
38.8
RHH5241_R3613
20.1
RHH5270_R3642
22.5
Naive CD4 T-cell nTPM: 14.5
Samples: 4
Max nTPM: 25.9
Min nTPM: 6.9
RHH5306_R3672
13.2
RHH5214_R3585
12.0
RHH5242_R3614
25.9
RHH5271_R3643
6.9
Naive CD8 T-cell nTPM: 12.2
Samples: 4
Max nTPM: 23.3
Min nTPM: 6.3
RHH5201_R3572
9.3
RHH5229_R3601
9.7
RHH5258_R3630
23.3
RHH5287_R3659
6.3
Non-Vd2 gdTCR nTPM: 19.1
Samples: 4
Max nTPM: 31.1
Min nTPM: 10.7
RHH5235_R3607
31.1
RHH5264_R3636
18.6
RHH5207_R3578
10.7
RHH5299_R3665
15.8
T-reg nTPM: 19.2
Samples: 4
Max nTPM: 29.0
Min nTPM: 11.0
RHH5301_R3667
11.0
RHH5237_R3609
29.0
RHH5266_R3638
12.6
RHH5209_R3580
24.0
Terminal effector memory CD4 T-cell nTPM: 9.7
Samples: 2
Max nTPM: 11.5
Min nTPM: 7.9
RHH5243_R3615
7.9
RHH5272_R3644
11.5
Terminal effector memory CD8 T-cell nTPM: 15.2
Samples: 4
Max nTPM: 24.8
Min nTPM: 7.2
RHH5232_R3604
13.9
RHH5204_R3575
7.2
RHH5261_R3633
24.8
RHH5296_R3662
14.7
Vd2 gdTCR nTPM: 14.8
Samples: 4
Max nTPM: 18.1
Min nTPM: 10.8
RHH5234_R3606
14.3
RHH5206_R3577
10.8
RHH5263_R3635
18.1
RHH5298_R3664
15.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
