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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
187.0
nTPM
Monaco:
309.4
nTPM
Schmiedel:
221.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
187.0
HPA sample
nTPM
gdT-cell nTPM: 131.9
Samples: 6
Max nTPM: 150.5
Min nTPM: 110.2
P10809_1007
110.2
P10809_1022
136.3
P10809_1041
147.2
P10809_1060
125.7
P10809_1077
150.5
P10809_1098
121.3
MAIT T-cell nTPM: 140.7
Samples: 6
Max nTPM: 181.7
Min nTPM: 98.1
P10809_1006
108.6
P10809_1024
155.5
P10809_1043
151.2
P10809_1062
149.2
P10809_1083
181.7
P10809_1097
98.1
Memory CD4 T-cell nTPM: 171.2
Samples: 6
Max nTPM: 197.0
Min nTPM: 154.6
P10809_1014
160.6
P10809_1026
197.0
P10809_1045
189.6
P10809_1064
158.3
P10809_1086
166.9
P10809_1113
154.6
Memory CD8 T-cell nTPM: 164.1
Samples: 5
Max nTPM: 197.1
Min nTPM: 130.9
P10809_1012
149.4
P10809_1027
197.1
P10809_1046
177.4
P10809_1065
165.7
P10809_1111
130.9
Naive CD4 T-cell nTPM: 187.1
Samples: 6
Max nTPM: 222.6
Min nTPM: 142.2
P10809_1015
180.5
P10809_1030
222.6
P10809_1049
201.7
P10809_1068
187.3
P10809_1085
188.0
P10809_1112
142.2
Naive CD8 T-cell nTPM: 155.3
Samples: 6
Max nTPM: 179.8
Min nTPM: 120.8
P10809_1016
179.8
P10809_1031
152.2
P10809_1050
155.8
P10809_1069
171.4
P10809_1087
152.0
P10809_1110
120.8
T-reg nTPM: 180.1
Samples: 6
Max nTPM: 278.0
Min nTPM: 142.9
P10809_1018
142.9
P10809_1037
150.9
P10809_1056
278.0
P10809_1075
164.6
P10809_1094
185.7
P10809_1106
158.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
309.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 239.8
Samples: 4
Max nTPM: 346.4
Min nTPM: 127.8
RHH5202_R3573
269.6
RHH5230_R3602
215.4
RHH5259_R3631
127.8
RHH5288_R3660
346.4
Effector memory CD8 T-cell nTPM: 208.6
Samples: 4
Max nTPM: 271.9
Min nTPM: 147.0
RHH5203_R3574
240.1
RHH5231_R3603
271.9
RHH5260_R3632
147.0
RHH5289_R3661
175.3
MAIT T-cell nTPM: 214.1
Samples: 4
Max nTPM: 270.0
Min nTPM: 130.0
RHH5233_R3605
244.9
RHH5205_R3576
130.0
RHH5262_R3634
211.6
RHH5297_R3663
270.0
Memory CD4 T-cell TFH nTPM: 309.5
Samples: 4
Max nTPM: 400.5
Min nTPM: 246.6
RHH5300_R3666
290.1
RHH5236_R3608
400.5
RHH5265_R3637
246.6
RHH5208_R3579
300.6
Memory CD4 T-cell Th1 nTPM: 263.8
Samples: 4
Max nTPM: 378.0
Min nTPM: 177.7
RHH5210_R3581
295.7
RHH5302_R3668
378.0
RHH5238_R3610
177.7
RHH5267_R3639
203.8
Memory CD4 T-cell Th1/Th17 nTPM: 238.2
Samples: 4
Max nTPM: 358.0
Min nTPM: 123.5
RHH5303_R3669
358.0
RHH5211_R3582
299.1
RHH5239_R3611
123.5
RHH5268_R3640
172.3
Memory CD4 T-cell Th17 nTPM: 186.2
Samples: 4
Max nTPM: 246.6
Min nTPM: 140.8
RHH5304_R3670
205.4
RHH5212_R3583
246.6
RHH5240_R3612
152.0
RHH5269_R3641
140.8
Memory CD4 T-cell Th2 nTPM: 269.4
Samples: 4
Max nTPM: 364.6
Min nTPM: 195.8
RHH5305_R3671
262.9
RHH5213_R3584
254.1
RHH5241_R3613
364.6
RHH5270_R3642
195.8
Naive CD4 T-cell nTPM: 255.5
Samples: 4
Max nTPM: 309.8
Min nTPM: 161.6
RHH5306_R3672
283.4
RHH5214_R3585
309.8
RHH5242_R3614
267.3
RHH5271_R3643
161.6
Naive CD8 T-cell nTPM: 211.6
Samples: 4
Max nTPM: 266.7
Min nTPM: 115.4
RHH5201_R3572
244.0
RHH5229_R3601
115.4
RHH5258_R3630
266.7
RHH5287_R3659
220.3
Non-Vd2 gdTCR nTPM: 209.6
Samples: 4
Max nTPM: 270.9
Min nTPM: 137.8
RHH5235_R3607
137.8
RHH5264_R3636
237.9
RHH5207_R3578
191.9
RHH5299_R3665
270.9
T-reg nTPM: 233.0
Samples: 4
Max nTPM: 291.4
Min nTPM: 163.2
RHH5301_R3667
291.4
RHH5237_R3609
289.3
RHH5266_R3638
163.2
RHH5209_R3580
188.0
Terminal effector memory CD4 T-cell nTPM: 240.4
Samples: 2
Max nTPM: 306.1
Min nTPM: 174.7
RHH5243_R3615
174.7
RHH5272_R3644
306.1
Terminal effector memory CD8 T-cell nTPM: 243.6
Samples: 4
Max nTPM: 285.5
Min nTPM: 151.6
RHH5232_R3604
268.5
RHH5204_R3575
285.5
RHH5261_R3633
151.6
RHH5296_R3662
268.6
Vd2 gdTCR nTPM: 230.6
Samples: 4
Max nTPM: 299.0
Min nTPM: 148.4
RHH5234_R3606
223.2
RHH5206_R3577
251.8
RHH5263_R3635
148.4
RHH5298_R3664
299.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.