HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:59.9 nTPM
HPA Brain:73.1 nTPM
GTEx:59.9 nTPM
FANTOM5:180.9 Scaled Tags Per Million
Pig:71.7 nTPM
Mouse:175.8 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008784Antibody CAB033036Antibody CAB058691
Glial cells HighHighHigh
Neuronal cells HighHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 73.1
Sample id Sample description nTPM
Hippocampus
nTPM: 68.6
1898 Male, age 80, left hemisphere 77.1
2529 Female, age 94, left hemisphere 75.0
2621 Female, age 67, right hemisphere 70.4
1911 Female, age 85, right hemisphere 66.4
1855 Male, age 76, left hemisphere 62.7
2148 Female, age 91, left hemisphere 60.1
Dentate gyrus
nTPM: 60.2
2246 Female, age 85, both hemispheres 65.4
1927 Female, age 91, both hemispheres 63.2
2531 Female, age 67, both hemispheres 59.1
2530 Female, age 94, left hemisphere 58.8
2010 Male, age 76, both hemispheres 58.6
2528 Male, age 74, both hemispheres 55.9
Entorhinal gyrus
nTPM: 62.7
1938 Female, age 85, left hemisphere 75.0
2764 Male, age 80, right hemisphere 74.0
2117 Female, age 91, right hemisphere 68.5
1787 Male, age 76, left hemisphere 61.6
2686 Male, age 75, right hemisphere 57.3
2613 Female, age 94, left hemisphere 39.9
Hippocampus, CA1
nTPM: 68.9
2749 Male, age 80, left hemisphere 95.3
1873 Female, age 85, both hemispheres 70.6
2527 Male, age 74, both hemispheres 68.9
2045 Male, age 76, both hemispheres 57.4
2082 Female, age 91, right hemisphere 52.3
Hippocampus, CA2
nTPM: 61.1
2249 Male, age 74, both hemispheres 77.4
1892 Male, age 76, both hemispheres 71.5
1963 Male, age 80, left hemisphere 58.2
2113 Female, age 91, right hemisphere 57.5
1940 Female, age 85, left hemisphere 54.2
2437 Female, age 94, left hemisphere 47.6
Hippocampus, CA3
nTPM: 64.1
1867 Male, age 76, both hemispheres 76.8
2137 Male, age 80, left hemisphere 72.1
1891 Female, age 85, both hemispheres 69.5
2620 Female, age 94, left hemisphere 58.6
2861 Female, age 67, both hemispheres 54.1
2436 Male, age 74, both hemispheres 53.4
Parahippocampal cortex
nTPM: 60.6
1850 Male, age 80, both hemispheres 79.2
1990 Female, age 91, right hemisphere 70.7
2245 Female, age 91, both hemispheres 67.4
1933 Female, age 85, both hemispheres 64.7
2532 Female, age 72, left hemisphere 62.4
2018 Male, age 76, both hemispheres 58.9
2250 Female, age 67, right hemisphere 56.5
2692 Male, age 74, both hemispheres 50.6
2693 Female, age 94, both hemispheres 48.4
2622 Female, age 67, right hemisphere 47.2
Perirhinal gyrus
nTPM: 73.1
1794 Male, age 80, right hemisphere 88.6
1847 Female, age 91, left hemisphere 83.5
1841 Female, age 85, right hemisphere 73.4
2848 Male, age 76, right hemisphere 61.9
2521 Female, age 94, right hemisphere 58.0
Subiculum
nTPM: 63.9
1901 Male, age 80, both hemispheres 75.5
1977 Female, age 85, both hemispheres 71.6
2619 Male, age 74, both hemispheres 64.7
2042 Male, age 76, both hemispheres 60.8
2438 Female, age 94, left hemisphere 60.4
2729 Female, age 91, right hemisphere 50.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 59.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 59.9
Samples: 197

Max nTPM: 99.1
Min nTPM: 18.7
Std nTPM: 16.0
Median nTPM: 59.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 99.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 96.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 96.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 93.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 92.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 92.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 90.6
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 89.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 89.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 86.9
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 86.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.9
FF:10169-103B7 60 years, female 221.2
FF:10153-102I9 76 years, female 140.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 71.7
Pig sample Sample description nTPM
Subiculum
nTPM: 68.6
Samples: 4

Max nTPM: 84.8
Min nTPM: 53.8
Sample A Female 84.8
Sample B Female 70.3
Sample C Male 65.4
Sample D Male 53.8
Dorsal hippocampus
nTPM: 71.7
Samples: 4

Max nTPM: 88.1
Min nTPM: 60.0
Sample A Female 88.1
Sample B Female 68.2
Sample C Male 70.5
Sample D Male 60.0
Entorhinal cortex
nTPM: 59.4
Samples: 4

Max nTPM: 67.8
Min nTPM: 50.6
Sample A Female 60.0
Sample B Female 67.8
Sample C Male 59.1
Sample D Male 50.6
Ventral hippocampus
nTPM: 69.9
Samples: 4

Max nTPM: 86.8
Min nTPM: 59.0
Sample A Female 63.3
Sample B Female 59.0
Sample C Male 86.8
Sample D Male 70.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 175.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 168.4
Samples: 4

Max nTPM: 180.6
Min nTPM: 156.1
Sample A Male 180.6
Sample B Male 157.6
Sample C Female 156.1
Sample D Female 179.2
Hippocampal formation
nTPM: 175.8
Samples: 4

Max nTPM: 188.0
Min nTPM: 160.5
Sample A Male 173.2
Sample B Male 181.4
Sample C Female 188.0
Sample D Female 160.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68301512 Antisense, RP_041130_01_D05, Mouse strain C57BL/6J (56 days, male) 18.4
69527830 Antisense, RP_050421_02_E08, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org