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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.7
nTPM
Monaco:
170.8
nTPM
Schmiedel:
354.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.7
HPA sample
nTPM
gdT-cell nTPM: 53.7
Samples: 6
Max nTPM: 66.5
Min nTPM: 39.3
P10809_1007
61.5
P10809_1022
63.0
P10809_1041
66.5
P10809_1060
39.3
P10809_1077
48.9
P10809_1098
42.9
MAIT T-cell nTPM: 50.0
Samples: 6
Max nTPM: 68.3
Min nTPM: 38.3
P10809_1006
68.3
P10809_1024
58.7
P10809_1043
50.3
P10809_1062
41.8
P10809_1083
42.7
P10809_1097
38.3
Memory CD4 T-cell nTPM: 36.6
Samples: 6
Max nTPM: 44.5
Min nTPM: 30.0
P10809_1014
44.5
P10809_1026
39.5
P10809_1045
32.5
P10809_1064
30.0
P10809_1086
35.2
P10809_1113
37.8
Memory CD8 T-cell nTPM: 45.9
Samples: 5
Max nTPM: 61.9
Min nTPM: 29.6
P10809_1012
61.3
P10809_1027
61.9
P10809_1046
42.5
P10809_1065
34.4
P10809_1111
29.6
Naive CD4 T-cell nTPM: 40.4
Samples: 6
Max nTPM: 57.3
Min nTPM: 24.5
P10809_1015
57.3
P10809_1030
38.1
P10809_1049
24.5
P10809_1068
36.2
P10809_1085
42.9
P10809_1112
43.3
Naive CD8 T-cell nTPM: 44.0
Samples: 6
Max nTPM: 65.0
Min nTPM: 29.6
P10809_1016
65.0
P10809_1031
53.2
P10809_1050
41.1
P10809_1069
29.6
P10809_1087
41.4
P10809_1110
33.8
T-reg nTPM: 31.1
Samples: 6
Max nTPM: 38.5
Min nTPM: 24.8
P10809_1018
38.5
P10809_1037
33.8
P10809_1056
27.6
P10809_1075
30.0
P10809_1094
31.9
P10809_1106
24.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
170.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 113.2
Samples: 4
Max nTPM: 145.5
Min nTPM: 84.3
RHH5202_R3573
145.5
RHH5230_R3602
97.8
RHH5259_R3631
84.3
RHH5288_R3660
125.1
Effector memory CD8 T-cell nTPM: 121.4
Samples: 4
Max nTPM: 161.9
Min nTPM: 87.3
RHH5203_R3574
161.9
RHH5231_R3603
87.3
RHH5260_R3632
99.5
RHH5289_R3661
136.8
MAIT T-cell nTPM: 170.8
Samples: 4
Max nTPM: 191.6
Min nTPM: 132.3
RHH5233_R3605
132.3
RHH5205_R3576
178.2
RHH5262_R3634
181.2
RHH5297_R3663
191.6
Memory CD4 T-cell TFH nTPM: 134.1
Samples: 4
Max nTPM: 165.4
Min nTPM: 103.5
RHH5300_R3666
165.4
RHH5236_R3608
103.5
RHH5265_R3637
137.7
RHH5208_R3579
129.7
Memory CD4 T-cell Th1 nTPM: 123.2
Samples: 4
Max nTPM: 158.3
Min nTPM: 79.4
RHH5210_R3581
131.4
RHH5302_R3668
158.3
RHH5238_R3610
79.4
RHH5267_R3639
123.6
Memory CD4 T-cell Th1/Th17 nTPM: 112.9
Samples: 4
Max nTPM: 134.2
Min nTPM: 87.5
RHH5303_R3669
134.2
RHH5211_R3582
109.8
RHH5239_R3611
87.5
RHH5268_R3640
120.1
Memory CD4 T-cell Th17 nTPM: 126.7
Samples: 4
Max nTPM: 166.9
Min nTPM: 104.5
RHH5304_R3670
166.9
RHH5212_R3583
118.6
RHH5240_R3612
116.6
RHH5269_R3641
104.5
Memory CD4 T-cell Th2 nTPM: 114.8
Samples: 4
Max nTPM: 124.0
Min nTPM: 103.3
RHH5305_R3671
124.0
RHH5213_R3584
123.6
RHH5241_R3613
108.4
RHH5270_R3642
103.3
Naive CD4 T-cell nTPM: 166.4
Samples: 4
Max nTPM: 203.1
Min nTPM: 133.2
RHH5306_R3672
203.1
RHH5214_R3585
143.8
RHH5242_R3614
185.5
RHH5271_R3643
133.2
Naive CD8 T-cell nTPM: 118.1
Samples: 4
Max nTPM: 165.2
Min nTPM: 54.5
RHH5201_R3572
93.2
RHH5229_R3601
54.5
RHH5258_R3630
165.2
RHH5287_R3659
159.5
Non-Vd2 gdTCR nTPM: 127.2
Samples: 4
Max nTPM: 165.8
Min nTPM: 107.9
RHH5235_R3607
124.3
RHH5264_R3636
107.9
RHH5207_R3578
110.9
RHH5299_R3665
165.8
T-reg nTPM: 127.8
Samples: 4
Max nTPM: 171.5
Min nTPM: 105.1
RHH5301_R3667
171.5
RHH5237_R3609
105.1
RHH5266_R3638
125.9
RHH5209_R3580
108.7
Terminal effector memory CD4 T-cell nTPM: 110.8
Samples: 2
Max nTPM: 131.5
Min nTPM: 90.0
RHH5243_R3615
90.0
RHH5272_R3644
131.5
Terminal effector memory CD8 T-cell nTPM: 139.0
Samples: 4
Max nTPM: 208.6
Min nTPM: 91.1
RHH5232_R3604
122.3
RHH5204_R3575
134.0
RHH5261_R3633
91.1
RHH5296_R3662
208.6
Vd2 gdTCR nTPM: 126.4
Samples: 4
Max nTPM: 172.5
Min nTPM: 91.2
RHH5234_R3606
133.0
RHH5206_R3577
91.2
RHH5263_R3635
108.8
RHH5298_R3664
172.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
