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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.4
nTPM
Monaco:
158.4
nTPM
Schmiedel:
193.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.4
HPA sample
nTPM
gdT-cell nTPM: 34.1
Samples: 6
Max nTPM: 42.6
Min nTPM: 28.5
P10809_1007
34.9
P10809_1022
34.6
P10809_1041
42.6
P10809_1060
33.6
P10809_1077
28.5
P10809_1098
30.6
MAIT T-cell nTPM: 41.0
Samples: 6
Max nTPM: 54.3
Min nTPM: 29.0
P10809_1006
54.3
P10809_1024
51.9
P10809_1043
36.4
P10809_1062
31.1
P10809_1083
29.0
P10809_1097
43.3
Memory CD4 T-cell nTPM: 47.5
Samples: 6
Max nTPM: 60.1
Min nTPM: 36.7
P10809_1014
60.1
P10809_1026
51.8
P10809_1045
52.2
P10809_1064
44.6
P10809_1086
36.7
P10809_1113
39.7
Memory CD8 T-cell nTPM: 45.2
Samples: 5
Max nTPM: 59.9
Min nTPM: 35.7
P10809_1012
46.8
P10809_1027
59.9
P10809_1046
44.4
P10809_1065
39.1
P10809_1111
35.7
Naive CD4 T-cell nTPM: 53.9
Samples: 6
Max nTPM: 64.2
Min nTPM: 39.7
P10809_1015
63.7
P10809_1030
64.2
P10809_1049
56.1
P10809_1068
56.2
P10809_1085
43.5
P10809_1112
39.7
Naive CD8 T-cell nTPM: 49.1
Samples: 6
Max nTPM: 70.6
Min nTPM: 37.5
P10809_1016
70.6
P10809_1031
56.4
P10809_1050
44.0
P10809_1069
44.0
P10809_1087
37.5
P10809_1110
42.0
T-reg nTPM: 75.4
Samples: 6
Max nTPM: 88.4
Min nTPM: 67.6
P10809_1018
71.7
P10809_1037
67.6
P10809_1056
81.4
P10809_1075
74.5
P10809_1094
88.4
P10809_1106
69.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 121.7
Samples: 4
Max nTPM: 158.3
Min nTPM: 85.8
RHH5202_R3573
123.4
RHH5230_R3602
119.2
RHH5259_R3631
85.8
RHH5288_R3660
158.3
Effector memory CD8 T-cell nTPM: 106.3
Samples: 4
Max nTPM: 130.3
Min nTPM: 59.8
RHH5203_R3574
130.3
RHH5231_R3603
118.2
RHH5260_R3632
59.8
RHH5289_R3661
116.8
MAIT T-cell nTPM: 96.4
Samples: 4
Max nTPM: 115.2
Min nTPM: 76.3
RHH5233_R3605
97.5
RHH5205_R3576
76.3
RHH5262_R3634
96.7
RHH5297_R3663
115.2
Memory CD4 T-cell TFH nTPM: 130.1
Samples: 4
Max nTPM: 147.8
Min nTPM: 106.0
RHH5300_R3666
147.8
RHH5236_R3608
135.7
RHH5265_R3637
130.9
RHH5208_R3579
106.0
Memory CD4 T-cell Th1 nTPM: 123.6
Samples: 4
Max nTPM: 168.6
Min nTPM: 96.4
RHH5210_R3581
120.8
RHH5302_R3668
168.6
RHH5238_R3610
96.4
RHH5267_R3639
108.5
Memory CD4 T-cell Th1/Th17 nTPM: 123.6
Samples: 4
Max nTPM: 171.5
Min nTPM: 55.1
RHH5303_R3669
171.5
RHH5211_R3582
154.7
RHH5239_R3611
55.1
RHH5268_R3640
113.1
Memory CD4 T-cell Th17 nTPM: 112.1
Samples: 4
Max nTPM: 131.8
Min nTPM: 91.6
RHH5304_R3670
131.8
RHH5212_R3583
122.3
RHH5240_R3612
91.6
RHH5269_R3641
102.7
Memory CD4 T-cell Th2 nTPM: 158.4
Samples: 4
Max nTPM: 181.0
Min nTPM: 113.8
RHH5305_R3671
174.1
RHH5213_R3584
164.5
RHH5241_R3613
181.0
RHH5270_R3642
113.8
Naive CD4 T-cell nTPM: 139.8
Samples: 4
Max nTPM: 184.0
Min nTPM: 111.8
RHH5306_R3672
184.0
RHH5214_R3585
144.5
RHH5242_R3614
111.8
RHH5271_R3643
119.0
Naive CD8 T-cell nTPM: 128.7
Samples: 4
Max nTPM: 171.9
Min nTPM: 73.9
RHH5201_R3572
171.9
RHH5229_R3601
73.9
RHH5258_R3630
121.8
RHH5287_R3659
147.2
Non-Vd2 gdTCR nTPM: 93.2
Samples: 4
Max nTPM: 111.6
Min nTPM: 64.1
RHH5235_R3607
64.1
RHH5264_R3636
111.6
RHH5207_R3578
102.3
RHH5299_R3665
94.7
T-reg nTPM: 127.8
Samples: 4
Max nTPM: 156.7
Min nTPM: 103.0
RHH5301_R3667
144.7
RHH5237_R3609
156.7
RHH5266_R3638
103.0
RHH5209_R3580
106.7
Terminal effector memory CD4 T-cell nTPM: 72.9
Samples: 2
Max nTPM: 91.6
Min nTPM: 54.1
RHH5243_R3615
54.1
RHH5272_R3644
91.6
Terminal effector memory CD8 T-cell nTPM: 96.9
Samples: 4
Max nTPM: 118.3
Min nTPM: 72.8
RHH5232_R3604
98.6
RHH5204_R3575
97.9
RHH5261_R3633
72.8
RHH5296_R3662
118.3
Vd2 gdTCR nTPM: 97.5
Samples: 4
Max nTPM: 123.5
Min nTPM: 84.3
RHH5234_R3606
84.3
RHH5206_R3577
123.5
RHH5263_R3635
89.6
RHH5298_R3664
92.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
