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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
82.2
nTPM
Monaco:
213.7
nTPM
Schmiedel:
92.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
82.2
HPA sample
nTPM
gdT-cell nTPM: 82.2
Samples: 6
Max nTPM: 95.6
Min nTPM: 69.6
P10809_1007
74.8
P10809_1022
87.4
P10809_1041
83.7
P10809_1060
95.6
P10809_1077
69.6
P10809_1098
82.3
MAIT T-cell nTPM: 81.1
Samples: 6
Max nTPM: 101.6
Min nTPM: 61.6
P10809_1006
75.3
P10809_1024
61.6
P10809_1043
77.7
P10809_1062
82.5
P10809_1083
87.8
P10809_1097
101.6
Memory CD4 T-cell nTPM: 63.9
Samples: 6
Max nTPM: 74.2
Min nTPM: 54.2
P10809_1014
67.2
P10809_1026
54.2
P10809_1045
62.2
P10809_1064
68.8
P10809_1086
56.5
P10809_1113
74.2
Memory CD8 T-cell nTPM: 78.2
Samples: 5
Max nTPM: 92.0
Min nTPM: 65.0
P10809_1012
65.0
P10809_1027
82.4
P10809_1046
92.0
P10809_1065
74.9
P10809_1111
76.9
Naive CD4 T-cell nTPM: 66.3
Samples: 6
Max nTPM: 81.2
Min nTPM: 51.4
P10809_1015
66.3
P10809_1030
51.4
P10809_1049
57.1
P10809_1068
77.5
P10809_1085
64.5
P10809_1112
81.2
Naive CD8 T-cell nTPM: 75.6
Samples: 6
Max nTPM: 88.1
Min nTPM: 68.9
P10809_1016
75.2
P10809_1031
71.0
P10809_1050
72.0
P10809_1069
88.1
P10809_1087
68.9
P10809_1110
78.2
T-reg nTPM: 69.9
Samples: 6
Max nTPM: 85.2
Min nTPM: 58.8
P10809_1018
67.6
P10809_1037
58.8
P10809_1056
63.4
P10809_1075
85.2
P10809_1094
63.4
P10809_1106
80.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
213.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 179.9
Samples: 4
Max nTPM: 231.1
Min nTPM: 95.3
RHH5202_R3573
231.1
RHH5230_R3602
212.6
RHH5259_R3631
95.3
RHH5288_R3660
180.5
Effector memory CD8 T-cell nTPM: 213.7
Samples: 4
Max nTPM: 247.2
Min nTPM: 158.6
RHH5203_R3574
247.2
RHH5231_R3603
235.4
RHH5260_R3632
158.6
RHH5289_R3661
213.6
MAIT T-cell nTPM: 182.4
Samples: 4
Max nTPM: 222.8
Min nTPM: 144.6
RHH5233_R3605
222.8
RHH5205_R3576
144.6
RHH5262_R3634
180.5
RHH5297_R3663
181.8
Memory CD4 T-cell TFH nTPM: 142.7
Samples: 4
Max nTPM: 160.2
Min nTPM: 115.9
RHH5300_R3666
140.0
RHH5236_R3608
160.2
RHH5265_R3637
115.9
RHH5208_R3579
154.5
Memory CD4 T-cell Th1 nTPM: 146.8
Samples: 4
Max nTPM: 194.9
Min nTPM: 112.5
RHH5210_R3581
194.9
RHH5302_R3668
161.2
RHH5238_R3610
112.5
RHH5267_R3639
118.7
Memory CD4 T-cell Th1/Th17 nTPM: 137.4
Samples: 4
Max nTPM: 202.0
Min nTPM: 78.5
RHH5303_R3669
156.7
RHH5211_R3582
202.0
RHH5239_R3611
78.5
RHH5268_R3640
112.4
Memory CD4 T-cell Th17 nTPM: 142.9
Samples: 4
Max nTPM: 173.5
Min nTPM: 100.1
RHH5304_R3670
161.9
RHH5212_R3583
173.5
RHH5240_R3612
135.9
RHH5269_R3641
100.1
Memory CD4 T-cell Th2 nTPM: 141.6
Samples: 4
Max nTPM: 154.1
Min nTPM: 127.1
RHH5305_R3671
138.4
RHH5213_R3584
154.1
RHH5241_R3613
146.6
RHH5270_R3642
127.1
Naive CD4 T-cell nTPM: 156.9
Samples: 4
Max nTPM: 163.5
Min nTPM: 149.2
RHH5306_R3672
159.3
RHH5214_R3585
163.5
RHH5242_R3614
155.6
RHH5271_R3643
149.2
Naive CD8 T-cell nTPM: 155.8
Samples: 4
Max nTPM: 187.0
Min nTPM: 107.5
RHH5201_R3572
187.0
RHH5229_R3601
107.5
RHH5258_R3630
182.7
RHH5287_R3659
145.8
Non-Vd2 gdTCR nTPM: 190.8
Samples: 4
Max nTPM: 238.9
Min nTPM: 140.8
RHH5235_R3607
140.8
RHH5264_R3636
214.4
RHH5207_R3578
238.9
RHH5299_R3665
169.1
T-reg nTPM: 148.3
Samples: 4
Max nTPM: 185.3
Min nTPM: 117.3
RHH5301_R3667
131.4
RHH5237_R3609
185.3
RHH5266_R3638
117.3
RHH5209_R3580
159.0
Terminal effector memory CD4 T-cell nTPM: 169.0
Samples: 2
Max nTPM: 175.6
Min nTPM: 162.4
RHH5243_R3615
175.6
RHH5272_R3644
162.4
Terminal effector memory CD8 T-cell nTPM: 190.5
Samples: 4
Max nTPM: 206.9
Min nTPM: 171.1
RHH5232_R3604
206.9
RHH5204_R3575
185.0
RHH5261_R3633
171.1
RHH5296_R3662
198.8
Vd2 gdTCR nTPM: 193.3
Samples: 4
Max nTPM: 237.9
Min nTPM: 168.9
RHH5234_R3606
197.0
RHH5206_R3577
237.9
RHH5263_R3635
168.9
RHH5298_R3664
169.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
