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NECAP1
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  • NECAP1
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

NECAP1
Synonyms DKFZP566B183
Gene descriptioni

Full gene name according to HGNC.

NECAP endocytosis associated 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 12
Cytoband p13.31
Chromosome location (bp) 8076939 - 8097881
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000089818 (version 109)
Entrez gene 25977
HGNC HGNC:24539
UniProt Q8NC96 (UniProt - Evidence at protein level)
neXtProt NX_Q8NC96
GeneCards NECAP1
Antibodypedia NECAP1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Involved in endocytosis.... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Endocytosis, Protein transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a protein containing two characteristic WXXF motifs. The encoded protein localizes to clathrin-coated vesicles, where it binds components of the adapter protein complexes and aids in endocytosis. Loss of function of this gene results in early infantile epileptic encephalopathy-21. There is a pseudogene for this gene on chromosome 7. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
NECAP1-201
ENSP00000341737
ENST00000339754
Q8NC96
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0005905 [clathrin-coated pit]
GO:0006897 [endocytosis]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030125 [clathrin vesicle coat]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
GO:0098793 [presynapse]
GO:0140238 [presynaptic endocytosis]
Show all
275 aa
29.7 kDa
No 0
NECAP1-204
ENSP00000439319
ENST00000540083
F5H2U7
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
116 aa
11.8 kDa
No 0
NECAP1-205
ENSP00000440658
ENST00000541948
F5GYH1
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006897 [endocytosis]
GO:0016020 [membrane]
GO:0030665 [clathrin-coated vesicle membrane]
Show all
240 aa
25.9 kDa
No 0
NECAP1-210
ENSP00000492254
ENST00000638237
A0A1W2PR09
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006897 [endocytosis]
GO:0016020 [membrane]
GO:0030665 [clathrin-coated vesicle membrane]
Show all
271 aa
29.4 kDa
No 0
NECAP1-211
ENSP00000492472
ENST00000638334
A0A1W2PRW5
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
93 aa
9.3 kDa
No 0
NECAP1-216
ENSP00000490999
ENST00000639167
A0A1W2PNT6
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
179 aa
19 kDa
No 0
NECAP1-219
ENSP00000492554
ENST00000639811
A0A1W2PRL5
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006897 [endocytosis]
GO:0016020 [membrane]
GO:0030665 [clathrin-coated vesicle membrane]
Show all
254 aa
28 kDa
No 0
NECAP1-221
ENSP00000491067
ENST00000639955
Q8NC96
[Direct mapping] Adaptin ear-binding coat-associated protein 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005829 [cytosol]
GO:0005886 [plasma membrane]
GO:0006897 [endocytosis]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016192 [vesicle-mediated transport]
GO:0030125 [clathrin vesicle coat]
GO:0030665 [clathrin-coated vesicle membrane]
GO:0031410 [cytoplasmic vesicle]
Show all
275 aa
29.7 kDa
No 0

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