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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.3
nTPM
Monaco:
214.0
nTPM
Schmiedel:
142.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.3
HPA sample
nTPM
gdT-cell nTPM: 23.8
Samples: 6
Max nTPM: 34.3
Min nTPM: 14.7
P10809_1007
24.6
P10809_1022
22.0
P10809_1041
18.4
P10809_1060
14.7
P10809_1077
28.5
P10809_1098
34.3
MAIT T-cell nTPM: 29.0
Samples: 6
Max nTPM: 48.2
Min nTPM: 12.6
P10809_1006
48.2
P10809_1024
12.6
P10809_1043
24.4
P10809_1062
18.7
P10809_1083
35.0
P10809_1097
35.1
Memory CD4 T-cell nTPM: 30.3
Samples: 6
Max nTPM: 43.2
Min nTPM: 17.8
P10809_1014
36.7
P10809_1026
29.8
P10809_1045
26.2
P10809_1064
43.2
P10809_1086
27.8
P10809_1113
17.8
Memory CD8 T-cell nTPM: 34.1
Samples: 5
Max nTPM: 45.1
Min nTPM: 16.2
P10809_1012
40.2
P10809_1027
16.2
P10809_1046
25.0
P10809_1065
45.1
P10809_1111
44.1
Naive CD4 T-cell nTPM: 35.3
Samples: 6
Max nTPM: 48.9
Min nTPM: 27.7
P10809_1015
48.9
P10809_1030
30.1
P10809_1049
27.7
P10809_1068
29.7
P10809_1085
45.2
P10809_1112
30.4
Naive CD8 T-cell nTPM: 33.9
Samples: 6
Max nTPM: 41.9
Min nTPM: 15.7
P10809_1016
41.6
P10809_1031
36.6
P10809_1050
29.7
P10809_1069
37.9
P10809_1087
15.7
P10809_1110
41.9
T-reg nTPM: 32.5
Samples: 6
Max nTPM: 43.0
Min nTPM: 13.6
P10809_1018
35.4
P10809_1037
26.2
P10809_1056
40.6
P10809_1075
43.0
P10809_1094
13.6
P10809_1106
36.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
214.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 160.4
Samples: 4
Max nTPM: 206.9
Min nTPM: 113.7
RHH5202_R3573
113.7
RHH5230_R3602
206.9
RHH5259_R3631
205.2
RHH5288_R3660
115.8
Effector memory CD8 T-cell nTPM: 165.8
Samples: 4
Max nTPM: 225.2
Min nTPM: 102.2
RHH5203_R3574
135.8
RHH5231_R3603
199.9
RHH5260_R3632
225.2
RHH5289_R3661
102.2
MAIT T-cell nTPM: 156.2
Samples: 4
Max nTPM: 217.4
Min nTPM: 123.2
RHH5233_R3605
129.0
RHH5205_R3576
155.3
RHH5262_R3634
217.4
RHH5297_R3663
123.2
Memory CD4 T-cell TFH nTPM: 155.3
Samples: 4
Max nTPM: 195.4
Min nTPM: 103.8
RHH5300_R3666
156.8
RHH5236_R3608
195.4
RHH5265_R3637
165.2
RHH5208_R3579
103.8
Memory CD4 T-cell Th1 nTPM: 175.2
Samples: 4
Max nTPM: 251.9
Min nTPM: 93.8
RHH5210_R3581
147.3
RHH5302_R3668
93.8
RHH5238_R3610
251.9
RHH5267_R3639
207.8
Memory CD4 T-cell Th1/Th17 nTPM: 166.9
Samples: 4
Max nTPM: 211.2
Min nTPM: 72.0
RHH5303_R3669
72.0
RHH5211_R3582
204.7
RHH5239_R3611
211.2
RHH5268_R3640
179.8
Memory CD4 T-cell Th17 nTPM: 145.8
Samples: 4
Max nTPM: 195.4
Min nTPM: 91.4
RHH5304_R3670
91.4
RHH5212_R3583
166.9
RHH5240_R3612
129.3
RHH5269_R3641
195.4
Memory CD4 T-cell Th2 nTPM: 163.4
Samples: 4
Max nTPM: 225.1
Min nTPM: 109.8
RHH5305_R3671
155.6
RHH5213_R3584
225.1
RHH5241_R3613
109.8
RHH5270_R3642
163.1
Naive CD4 T-cell nTPM: 200.9
Samples: 4
Max nTPM: 208.9
Min nTPM: 188.3
RHH5306_R3672
199.9
RHH5214_R3585
208.9
RHH5242_R3614
188.3
RHH5271_R3643
206.3
Naive CD8 T-cell nTPM: 202.8
Samples: 4
Max nTPM: 301.1
Min nTPM: 118.3
RHH5201_R3572
118.3
RHH5229_R3601
301.1
RHH5258_R3630
212.9
RHH5287_R3659
178.8
Non-Vd2 gdTCR nTPM: 154.0
Samples: 4
Max nTPM: 205.3
Min nTPM: 112.0
RHH5235_R3607
205.3
RHH5264_R3636
129.2
RHH5207_R3578
112.0
RHH5299_R3665
169.5
T-reg nTPM: 214.0
Samples: 4
Max nTPM: 249.2
Min nTPM: 168.6
RHH5301_R3667
168.6
RHH5237_R3609
249.2
RHH5266_R3638
197.1
RHH5209_R3580
241.0
Terminal effector memory CD4 T-cell nTPM: 175.1
Samples: 2
Max nTPM: 199.5
Min nTPM: 150.6
RHH5243_R3615
199.5
RHH5272_R3644
150.6
Terminal effector memory CD8 T-cell nTPM: 144.4
Samples: 4
Max nTPM: 211.9
Min nTPM: 78.4
RHH5232_R3604
150.6
RHH5204_R3575
136.8
RHH5261_R3633
211.9
RHH5296_R3662
78.4
Vd2 gdTCR nTPM: 176.1
Samples: 4
Max nTPM: 215.9
Min nTPM: 145.9
RHH5234_R3606
177.3
RHH5206_R3577
145.9
RHH5263_R3635
215.9
RHH5298_R3664
165.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
