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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
98.7
nTPM
Monaco:
24.7
nTPM
Schmiedel:
18.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.7
HPA sample
nTPM
gdT-cell nTPM: 49.1
Samples: 6
Max nTPM: 56.4
Min nTPM: 43.8
P10809_1007
44.7
P10809_1022
47.0
P10809_1041
55.3
P10809_1060
43.8
P10809_1077
56.4
P10809_1098
47.3
MAIT T-cell nTPM: 62.1
Samples: 6
Max nTPM: 117.7
Min nTPM: 42.9
P10809_1006
42.9
P10809_1024
117.7
P10809_1043
56.6
P10809_1062
45.8
P10809_1083
53.6
P10809_1097
55.9
Memory CD4 T-cell nTPM: 85.8
Samples: 6
Max nTPM: 104.9
Min nTPM: 71.4
P10809_1014
73.7
P10809_1026
104.9
P10809_1045
96.1
P10809_1064
71.4
P10809_1086
83.1
P10809_1113
85.8
Memory CD8 T-cell nTPM: 61.1
Samples: 5
Max nTPM: 68.4
Min nTPM: 49.8
P10809_1012
61.6
P10809_1027
68.4
P10809_1046
59.8
P10809_1065
49.8
P10809_1111
66.0
Naive CD4 T-cell nTPM: 98.7
Samples: 6
Max nTPM: 118.1
Min nTPM: 84.6
P10809_1015
84.6
P10809_1030
118.1
P10809_1049
112.0
P10809_1068
88.8
P10809_1085
91.2
P10809_1112
97.6
Naive CD8 T-cell nTPM: 83.9
Samples: 6
Max nTPM: 107.5
Min nTPM: 65.2
P10809_1016
85.6
P10809_1031
107.5
P10809_1050
87.0
P10809_1069
69.3
P10809_1087
65.2
P10809_1110
88.7
T-reg nTPM: 77.6
Samples: 6
Max nTPM: 97.8
Min nTPM: 60.6
P10809_1018
69.3
P10809_1037
97.8
P10809_1056
81.5
P10809_1075
79.3
P10809_1094
60.6
P10809_1106
76.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 22.7
Samples: 4
Max nTPM: 36.5
Min nTPM: 8.5
RHH5202_R3573
16.2
RHH5230_R3602
8.5
RHH5259_R3631
29.7
RHH5288_R3660
36.5
Effector memory CD8 T-cell nTPM: 8.2
Samples: 4
Max nTPM: 10.5
Min nTPM: 5.9
RHH5203_R3574
8.8
RHH5231_R3603
5.9
RHH5260_R3632
7.7
RHH5289_R3661
10.5
MAIT T-cell nTPM: 13.1
Samples: 4
Max nTPM: 16.8
Min nTPM: 8.0
RHH5233_R3605
8.0
RHH5205_R3576
16.8
RHH5262_R3634
10.8
RHH5297_R3663
16.8
Memory CD4 T-cell TFH nTPM: 20.6
Samples: 4
Max nTPM: 31.7
Min nTPM: 13.4
RHH5300_R3666
13.4
RHH5236_R3608
31.7
RHH5265_R3637
13.7
RHH5208_R3579
23.6
Memory CD4 T-cell Th1 nTPM: 22.6
Samples: 4
Max nTPM: 36.0
Min nTPM: 6.9
RHH5210_R3581
6.9
RHH5302_R3668
36.0
RHH5238_R3610
28.1
RHH5267_R3639
19.4
Memory CD4 T-cell Th1/Th17 nTPM: 19.9
Samples: 4
Max nTPM: 26.3
Min nTPM: 15.6
RHH5303_R3669
15.6
RHH5211_R3582
26.3
RHH5239_R3611
19.3
RHH5268_R3640
18.2
Memory CD4 T-cell Th17 nTPM: 20.5
Samples: 4
Max nTPM: 24.3
Min nTPM: 15.3
RHH5304_R3670
22.9
RHH5212_R3583
24.3
RHH5240_R3612
19.3
RHH5269_R3641
15.3
Memory CD4 T-cell Th2 nTPM: 19.2
Samples: 4
Max nTPM: 27.5
Min nTPM: 12.8
RHH5305_R3671
27.5
RHH5213_R3584
17.4
RHH5241_R3613
18.9
RHH5270_R3642
12.8
Naive CD4 T-cell nTPM: 24.7
Samples: 4
Max nTPM: 35.4
Min nTPM: 14.1
RHH5306_R3672
35.4
RHH5214_R3585
32.1
RHH5242_R3614
17.2
RHH5271_R3643
14.1
Naive CD8 T-cell nTPM: 23.7
Samples: 4
Max nTPM: 29.1
Min nTPM: 17.8
RHH5201_R3572
17.8
RHH5229_R3601
29.1
RHH5258_R3630
25.1
RHH5287_R3659
22.9
Non-Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 11.1
Min nTPM: 5.1
RHH5235_R3607
10.5
RHH5264_R3636
11.1
RHH5207_R3578
5.1
RHH5299_R3665
7.6
T-reg nTPM: 18.8
Samples: 4
Max nTPM: 21.9
Min nTPM: 14.5
RHH5301_R3667
21.9
RHH5237_R3609
21.1
RHH5266_R3638
17.8
RHH5209_R3580
14.5
Terminal effector memory CD4 T-cell nTPM: 9.9
Samples: 2
Max nTPM: 13.3
Min nTPM: 6.4
RHH5243_R3615
13.3
RHH5272_R3644
6.4
Terminal effector memory CD8 T-cell nTPM: 14.3
Samples: 4
Max nTPM: 26.9
Min nTPM: 9.1
RHH5232_R3604
9.1
RHH5204_R3575
26.9
RHH5261_R3633
9.1
RHH5296_R3662
12.1
Vd2 gdTCR nTPM: 16.1
Samples: 4
Max nTPM: 21.1
Min nTPM: 7.7
RHH5234_R3606
7.7
RHH5206_R3577
21.1
RHH5263_R3635
16.2
RHH5298_R3664
19.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
