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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
803.5
nTPM
Monaco:
95.8
nTPM
Schmiedel:
40.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
803.5
HPA sample
nTPM
gdT-cell nTPM: 781.9
Samples: 6
Max nTPM: 993.5
Min nTPM: 471.6
P10809_1007
471.6
P10809_1022
877.6
P10809_1041
993.5
P10809_1060
674.3
P10809_1077
906.9
P10809_1098
767.6
MAIT T-cell nTPM: 675.1
Samples: 6
Max nTPM: 909.6
Min nTPM: 270.9
P10809_1006
270.9
P10809_1024
736.7
P10809_1043
843.6
P10809_1062
656.6
P10809_1083
633.3
P10809_1097
909.6
Memory CD4 T-cell nTPM: 757.7
Samples: 6
Max nTPM: 961.2
Min nTPM: 401.1
P10809_1014
401.1
P10809_1026
961.2
P10809_1045
803.9
P10809_1064
841.6
P10809_1086
820.5
P10809_1113
717.8
Memory CD8 T-cell nTPM: 768.7
Samples: 5
Max nTPM: 952.2
Min nTPM: 332.1
P10809_1012
332.1
P10809_1027
952.2
P10809_1046
901.3
P10809_1065
881.2
P10809_1111
776.9
Naive CD4 T-cell nTPM: 803.6
Samples: 6
Max nTPM: 1275.8
Min nTPM: 353.2
P10809_1015
353.2
P10809_1030
901.2
P10809_1049
1275.8
P10809_1068
772.9
P10809_1085
806.5
P10809_1112
711.7
Naive CD8 T-cell nTPM: 796.5
Samples: 6
Max nTPM: 944.6
Min nTPM: 433.0
P10809_1016
433.0
P10809_1031
904.8
P10809_1050
896.9
P10809_1069
944.6
P10809_1087
905.1
P10809_1110
694.4
T-reg nTPM: 774.7
Samples: 6
Max nTPM: 1118.1
Min nTPM: 349.3
P10809_1018
349.3
P10809_1037
870.3
P10809_1056
1118.1
P10809_1075
727.0
P10809_1094
816.8
P10809_1106
766.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.4
Samples: 4
Max nTPM: 94.2
Min nTPM: 26.6
RHH5202_R3573
26.6
RHH5230_R3602
68.3
RHH5259_R3631
94.2
RHH5288_R3660
40.5
Effector memory CD8 T-cell nTPM: 50.8
Samples: 4
Max nTPM: 64.0
Min nTPM: 35.9
RHH5203_R3574
57.1
RHH5231_R3603
35.9
RHH5260_R3632
64.0
RHH5289_R3661
46.1
MAIT T-cell nTPM: 61.5
Samples: 4
Max nTPM: 96.7
Min nTPM: 39.6
RHH5233_R3605
48.6
RHH5205_R3576
96.7
RHH5262_R3634
61.0
RHH5297_R3663
39.6
Memory CD4 T-cell TFH nTPM: 47.8
Samples: 4
Max nTPM: 62.1
Min nTPM: 35.3
RHH5300_R3666
42.5
RHH5236_R3608
62.1
RHH5265_R3637
51.1
RHH5208_R3579
35.3
Memory CD4 T-cell Th1 nTPM: 69.5
Samples: 4
Max nTPM: 109.9
Min nTPM: 34.7
RHH5210_R3581
34.7
RHH5302_R3668
53.6
RHH5238_R3610
109.9
RHH5267_R3639
79.7
Memory CD4 T-cell Th1/Th17 nTPM: 65.0
Samples: 4
Max nTPM: 79.9
Min nTPM: 57.8
RHH5303_R3669
58.1
RHH5211_R3582
57.8
RHH5239_R3611
64.0
RHH5268_R3640
79.9
Memory CD4 T-cell Th17 nTPM: 61.7
Samples: 4
Max nTPM: 80.3
Min nTPM: 42.9
RHH5304_R3670
80.3
RHH5212_R3583
42.9
RHH5240_R3612
72.0
RHH5269_R3641
51.4
Memory CD4 T-cell Th2 nTPM: 53.3
Samples: 4
Max nTPM: 69.5
Min nTPM: 43.4
RHH5305_R3671
69.5
RHH5213_R3584
52.7
RHH5241_R3613
43.4
RHH5270_R3642
47.7
Naive CD4 T-cell nTPM: 59.9
Samples: 4
Max nTPM: 85.5
Min nTPM: 32.8
RHH5306_R3672
54.3
RHH5214_R3585
85.5
RHH5242_R3614
32.8
RHH5271_R3643
67.1
Naive CD8 T-cell nTPM: 48.2
Samples: 4
Max nTPM: 68.5
Min nTPM: 31.2
RHH5201_R3572
31.2
RHH5229_R3601
58.2
RHH5258_R3630
34.7
RHH5287_R3659
68.5
Non-Vd2 gdTCR nTPM: 87.7
Samples: 4
Max nTPM: 92.5
Min nTPM: 83.4
RHH5235_R3607
87.2
RHH5264_R3636
87.5
RHH5207_R3578
92.5
RHH5299_R3665
83.4
T-reg nTPM: 55.2
Samples: 4
Max nTPM: 70.1
Min nTPM: 47.4
RHH5301_R3667
47.4
RHH5237_R3609
49.6
RHH5266_R3638
70.1
RHH5209_R3580
53.5
Terminal effector memory CD4 T-cell nTPM: 58.2
Samples: 2
Max nTPM: 65.2
Min nTPM: 51.2
RHH5243_R3615
65.2
RHH5272_R3644
51.2
Terminal effector memory CD8 T-cell nTPM: 95.8
Samples: 4
Max nTPM: 147.6
Min nTPM: 44.8
RHH5232_R3604
44.8
RHH5204_R3575
131.2
RHH5261_R3633
147.6
RHH5296_R3662
59.6
Vd2 gdTCR nTPM: 84.4
Samples: 4
Max nTPM: 161.2
Min nTPM: 35.9
RHH5234_R3606
35.9
RHH5206_R3577
161.2
RHH5263_R3635
70.6
RHH5298_R3664
70.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
