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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
163.9
nTPM
Monaco:
137.0
nTPM
Schmiedel:
235.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
163.9
HPA sample
nTPM
gdT-cell nTPM: 153.0
Samples: 6
Max nTPM: 216.8
Min nTPM: 92.0
P10809_1007
92.0
P10809_1022
181.5
P10809_1041
216.8
P10809_1060
158.0
P10809_1077
131.2
P10809_1098
138.5
MAIT T-cell nTPM: 154.8
Samples: 6
Max nTPM: 199.5
Min nTPM: 94.9
P10809_1006
94.9
P10809_1024
193.1
P10809_1043
199.5
P10809_1062
128.0
P10809_1083
169.9
P10809_1097
143.3
Memory CD4 T-cell nTPM: 154.5
Samples: 6
Max nTPM: 198.2
Min nTPM: 91.6
P10809_1014
91.6
P10809_1026
198.2
P10809_1045
185.4
P10809_1064
154.9
P10809_1086
136.6
P10809_1113
160.4
Memory CD8 T-cell nTPM: 145.4
Samples: 5
Max nTPM: 172.1
Min nTPM: 99.5
P10809_1012
99.5
P10809_1027
167.4
P10809_1046
172.1
P10809_1065
135.4
P10809_1111
152.6
Naive CD4 T-cell nTPM: 151.1
Samples: 6
Max nTPM: 229.0
Min nTPM: 79.3
P10809_1015
79.3
P10809_1030
144.2
P10809_1049
229.0
P10809_1068
155.3
P10809_1085
147.4
P10809_1112
151.4
Naive CD8 T-cell nTPM: 155.4
Samples: 6
Max nTPM: 221.5
Min nTPM: 90.6
P10809_1016
90.6
P10809_1031
221.5
P10809_1050
158.2
P10809_1069
157.7
P10809_1087
129.2
P10809_1110
174.9
T-reg nTPM: 163.9
Samples: 6
Max nTPM: 208.5
Min nTPM: 99.2
P10809_1018
99.2
P10809_1037
165.3
P10809_1056
208.5
P10809_1075
139.8
P10809_1094
163.7
P10809_1106
206.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
137.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.8
Samples: 4
Max nTPM: 135.9
Min nTPM: 94.0
RHH5202_R3573
129.4
RHH5230_R3602
115.9
RHH5259_R3631
94.0
RHH5288_R3660
135.9
Effector memory CD8 T-cell nTPM: 125.7
Samples: 4
Max nTPM: 156.2
Min nTPM: 92.5
RHH5203_R3574
126.0
RHH5231_R3603
156.2
RHH5260_R3632
92.5
RHH5289_R3661
128.2
MAIT T-cell nTPM: 121.4
Samples: 4
Max nTPM: 138.1
Min nTPM: 91.7
RHH5233_R3605
138.1
RHH5205_R3576
91.7
RHH5262_R3634
126.9
RHH5297_R3663
129.0
Memory CD4 T-cell TFH nTPM: 129.9
Samples: 4
Max nTPM: 146.9
Min nTPM: 106.4
RHH5300_R3666
106.4
RHH5236_R3608
135.2
RHH5265_R3637
131.0
RHH5208_R3579
146.9
Memory CD4 T-cell Th1 nTPM: 107.2
Samples: 4
Max nTPM: 132.8
Min nTPM: 84.9
RHH5210_R3581
132.8
RHH5302_R3668
114.7
RHH5238_R3610
96.3
RHH5267_R3639
84.9
Memory CD4 T-cell Th1/Th17 nTPM: 112.7
Samples: 4
Max nTPM: 154.2
Min nTPM: 62.3
RHH5303_R3669
137.4
RHH5211_R3582
154.2
RHH5239_R3611
62.3
RHH5268_R3640
96.8
Memory CD4 T-cell Th17 nTPM: 107.7
Samples: 4
Max nTPM: 150.3
Min nTPM: 85.3
RHH5304_R3670
98.4
RHH5212_R3583
150.3
RHH5240_R3612
96.7
RHH5269_R3641
85.3
Memory CD4 T-cell Th2 nTPM: 129.4
Samples: 4
Max nTPM: 159.8
Min nTPM: 111.0
RHH5305_R3671
113.5
RHH5213_R3584
133.1
RHH5241_R3613
159.8
RHH5270_R3642
111.0
Naive CD4 T-cell nTPM: 112.9
Samples: 4
Max nTPM: 138.7
Min nTPM: 84.5
RHH5306_R3672
112.4
RHH5214_R3585
138.7
RHH5242_R3614
115.8
RHH5271_R3643
84.5
Naive CD8 T-cell nTPM: 129.4
Samples: 4
Max nTPM: 155.2
Min nTPM: 85.7
RHH5201_R3572
155.2
RHH5229_R3601
85.7
RHH5258_R3630
154.2
RHH5287_R3659
122.3
Non-Vd2 gdTCR nTPM: 129.7
Samples: 4
Max nTPM: 157.0
Min nTPM: 91.0
RHH5235_R3607
91.0
RHH5264_R3636
157.0
RHH5207_R3578
125.5
RHH5299_R3665
145.3
T-reg nTPM: 115.0
Samples: 4
Max nTPM: 156.4
Min nTPM: 97.8
RHH5301_R3667
98.9
RHH5237_R3609
156.4
RHH5266_R3638
97.8
RHH5209_R3580
106.7
Terminal effector memory CD4 T-cell nTPM: 107.5
Samples: 2
Max nTPM: 117.8
Min nTPM: 97.2
RHH5243_R3615
97.2
RHH5272_R3644
117.8
Terminal effector memory CD8 T-cell nTPM: 137.0
Samples: 4
Max nTPM: 155.6
Min nTPM: 93.8
RHH5232_R3604
151.7
RHH5204_R3575
146.8
RHH5261_R3633
93.8
RHH5296_R3662
155.6
Vd2 gdTCR nTPM: 128.8
Samples: 4
Max nTPM: 158.3
Min nTPM: 96.7
RHH5234_R3606
143.9
RHH5206_R3577
158.3
RHH5263_R3635
96.7
RHH5298_R3664
116.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
