HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:42.2 nTPM
HPA Brain:61.9 nTPM
GTEx:42.2 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:57.3 nTPM
Mouse:125.6 nTPM
Allen mouse:14.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043527Antibody HPA056706
Glial cells Not detectedMedium
Neuronal cells Not detectedLow




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.9
Sample id Sample description nTPM
Hippocampus
nTPM: 55.5
2621 Female, age 67, right hemisphere 61.9
2148 Female, age 91, left hemisphere 58.4
1855 Male, age 76, left hemisphere 54.7
2529 Female, age 94, left hemisphere 53.5
1898 Male, age 80, left hemisphere 52.2
1911 Female, age 85, right hemisphere 52.2
Dentate gyrus
nTPM: 56.9
2531 Female, age 67, both hemispheres 76.9
1927 Female, age 91, both hemispheres 56.9
2530 Female, age 94, left hemisphere 56.2
2246 Female, age 85, both hemispheres 51.1
2010 Male, age 76, both hemispheres 50.9
2528 Male, age 74, both hemispheres 49.3
Entorhinal gyrus
nTPM: 53.1
2613 Female, age 94, left hemisphere 66.0
1787 Male, age 76, left hemisphere 58.0
2764 Male, age 80, right hemisphere 52.8
1938 Female, age 85, left hemisphere 52.4
2686 Male, age 75, right hemisphere 46.7
2117 Female, age 91, right hemisphere 42.8
Hippocampus, CA1
nTPM: 55.2
2749 Male, age 80, left hemisphere 74.2
2045 Male, age 76, both hemispheres 57.6
1873 Female, age 85, both hemispheres 56.0
2527 Male, age 74, both hemispheres 50.4
2082 Female, age 91, right hemisphere 37.7
Hippocampus, CA2
nTPM: 49.6
1963 Male, age 80, left hemisphere 62.7
1892 Male, age 76, both hemispheres 59.4
2437 Female, age 94, left hemisphere 53.6
1940 Female, age 85, left hemisphere 45.9
2249 Male, age 74, both hemispheres 39.8
2113 Female, age 91, right hemisphere 36.3
Hippocampus, CA3
nTPM: 61.9
2861 Female, age 67, both hemispheres 85.1
2620 Female, age 94, left hemisphere 71.5
2137 Male, age 80, left hemisphere 71.3
1867 Male, age 76, both hemispheres 56.3
1891 Female, age 85, both hemispheres 45.9
2436 Male, age 74, both hemispheres 41.6
Parahippocampal cortex
nTPM: 47.2
2622 Female, age 67, right hemisphere 54.7
2245 Female, age 91, both hemispheres 52.2
1933 Female, age 85, both hemispheres 51.2
2532 Female, age 72, left hemisphere 47.6
1990 Female, age 91, right hemisphere 45.6
2018 Male, age 76, both hemispheres 45.0
2693 Female, age 94, both hemispheres 44.8
1850 Male, age 80, both hemispheres 44.3
2250 Female, age 67, right hemisphere 43.5
2692 Male, age 74, both hemispheres 42.8
Perirhinal gyrus
nTPM: 46.5
1794 Male, age 80, right hemisphere 50.5
1847 Female, age 91, left hemisphere 49.8
2521 Female, age 94, right hemisphere 47.6
1841 Female, age 85, right hemisphere 43.5
2848 Male, age 76, right hemisphere 41.0
Subiculum
nTPM: 49.7
1901 Male, age 80, both hemispheres 53.0
1977 Female, age 85, both hemispheres 52.3
2438 Female, age 94, left hemisphere 51.1
2042 Male, age 76, both hemispheres 50.2
2619 Male, age 74, both hemispheres 46.5
2729 Female, age 91, right hemisphere 45.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.2
Samples: 197

Max nTPM: 94.4
Min nTPM: 15.2
Std nTPM: 13.0
Median nTPM: 42.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 94.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 81.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 76.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 73.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 73.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 68.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 67.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 67.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10169-103B7 60 years, female 39.4
FF:10153-102I9 76 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.3
Pig sample Sample description nTPM
Subiculum
nTPM: 43.4
Samples: 4

Max nTPM: 55.3
Min nTPM: 37.9
Sample A Female 55.3
Sample B Female 40.6
Sample C Male 39.8
Sample D Male 37.9
Dorsal hippocampus
nTPM: 57.4
Samples: 4

Max nTPM: 67.7
Min nTPM: 46.4
Sample A Female 67.7
Sample B Female 63.3
Sample C Male 46.4
Sample D Male 52.0
Entorhinal cortex
nTPM: 44.4
Samples: 4

Max nTPM: 48.7
Min nTPM: 41.8
Sample A Female 44.2
Sample B Female 41.8
Sample C Male 48.7
Sample D Male 42.9
Ventral hippocampus
nTPM: 50.0
Samples: 4

Max nTPM: 77.6
Min nTPM: 36.4
Sample A Female 36.4
Sample B Female 37.7
Sample C Male 48.3
Sample D Male 77.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 125.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 125.6
Samples: 4

Max nTPM: 132.7
Min nTPM: 117.3
Sample A Male 124.6
Sample B Male 132.7
Sample C Female 117.3
Sample D Female 127.8
Hippocampal formation
nTPM: 125.5
Samples: 4

Max nTPM: 130.9
Min nTPM: 119.0
Sample A Male 119.0
Sample B Male 130.9
Sample C Female 128.8
Sample D Female 123.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.2
69887403 Antisense, RP_050512_03_F05, Mouse strain C57BL/6J (56 days, male) 14.2

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