We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
52.2
nTPM
Monaco:
19.2
nTPM
Schmiedel:
47.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
52.2
HPA sample
nTPM
gdT-cell nTPM: 32.7
Samples: 6
Max nTPM: 99.3
Min nTPM: 10.3
P10809_1007
22.7
P10809_1022
99.3
P10809_1041
23.1
P10809_1060
10.3
P10809_1077
27.5
P10809_1098
13.0
MAIT T-cell nTPM: 52.2
Samples: 6
Max nTPM: 174.3
Min nTPM: 9.8
P10809_1006
9.8
P10809_1024
174.3
P10809_1043
20.0
P10809_1062
13.8
P10809_1083
71.9
P10809_1097
23.3
Memory CD4 T-cell nTPM: 20.1
Samples: 6
Max nTPM: 29.1
Min nTPM: 8.4
P10809_1014
24.9
P10809_1026
27.6
P10809_1045
14.2
P10809_1064
8.4
P10809_1086
29.1
P10809_1113
16.3
Memory CD8 T-cell nTPM: 22.6
Samples: 5
Max nTPM: 57.5
Min nTPM: 9.0
P10809_1012
57.5
P10809_1027
9.0
P10809_1046
11.2
P10809_1065
12.7
P10809_1111
22.7
Naive CD4 T-cell nTPM: 20.0
Samples: 6
Max nTPM: 39.6
Min nTPM: 7.5
P10809_1015
14.1
P10809_1030
20.0
P10809_1049
39.6
P10809_1068
7.5
P10809_1085
15.5
P10809_1112
23.2
Naive CD8 T-cell nTPM: 17.8
Samples: 6
Max nTPM: 26.6
Min nTPM: 7.5
P10809_1016
18.5
P10809_1031
18.5
P10809_1050
7.5
P10809_1069
15.0
P10809_1087
20.8
P10809_1110
26.6
T-reg nTPM: 31.1
Samples: 6
Max nTPM: 60.8
Min nTPM: 6.5
P10809_1018
60.8
P10809_1037
23.7
P10809_1056
6.5
P10809_1075
25.4
P10809_1094
30.0
P10809_1106
40.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
19.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 4.2
Samples: 4
Max nTPM: 5.0
Min nTPM: 2.6
RHH5202_R3573
5.0
RHH5230_R3602
2.6
RHH5259_R3631
4.1
RHH5288_R3660
4.9
Effector memory CD8 T-cell nTPM: 4.9
Samples: 4
Max nTPM: 7.5
Min nTPM: 2.9
RHH5203_R3574
4.1
RHH5231_R3603
7.5
RHH5260_R3632
2.9
RHH5289_R3661
5.0
MAIT T-cell nTPM: 2.6
Samples: 4
Max nTPM: 4.9
Min nTPM: 1.4
RHH5233_R3605
1.4
RHH5205_R3576
2.7
RHH5262_R3634
1.5
RHH5297_R3663
4.9
Memory CD4 T-cell TFH nTPM: 13.6
Samples: 4
Max nTPM: 27.1
Min nTPM: 4.7
RHH5300_R3666
7.5
RHH5236_R3608
27.1
RHH5265_R3637
4.7
RHH5208_R3579
15.2
Memory CD4 T-cell Th1 nTPM: 8.3
Samples: 4
Max nTPM: 10.7
Min nTPM: 3.4
RHH5210_R3581
10.5
RHH5302_R3668
10.7
RHH5238_R3610
8.7
RHH5267_R3639
3.4
Memory CD4 T-cell Th1/Th17 nTPM: 10.2
Samples: 4
Max nTPM: 16.0
Min nTPM: 6.9
RHH5303_R3669
9.1
RHH5211_R3582
16.0
RHH5239_R3611
8.8
RHH5268_R3640
6.9
Memory CD4 T-cell Th17 nTPM: 18.9
Samples: 4
Max nTPM: 24.5
Min nTPM: 7.7
RHH5304_R3670
19.2
RHH5212_R3583
7.7
RHH5240_R3612
24.0
RHH5269_R3641
24.5
Memory CD4 T-cell Th2 nTPM: 19.2
Samples: 4
Max nTPM: 29.0
Min nTPM: 8.8
RHH5305_R3671
8.8
RHH5213_R3584
16.2
RHH5241_R3613
22.6
RHH5270_R3642
29.0
Naive CD4 T-cell nTPM: 11.3
Samples: 4
Max nTPM: 17.9
Min nTPM: 6.1
RHH5306_R3672
9.2
RHH5214_R3585
11.8
RHH5242_R3614
17.9
RHH5271_R3643
6.1
Naive CD8 T-cell nTPM: 5.5
Samples: 4
Max nTPM: 8.7
Min nTPM: 2.8
RHH5201_R3572
2.8
RHH5229_R3601
8.7
RHH5258_R3630
4.2
RHH5287_R3659
6.4
Non-Vd2 gdTCR nTPM: 2.8
Samples: 4
Max nTPM: 4.3
Min nTPM: 0.5
RHH5235_R3607
2.5
RHH5264_R3636
0.5
RHH5207_R3578
4.3
RHH5299_R3665
3.7
T-reg nTPM: 13.6
Samples: 4
Max nTPM: 17.6
Min nTPM: 6.5
RHH5301_R3667
6.5
RHH5237_R3609
13.2
RHH5266_R3638
17.0
RHH5209_R3580
17.6
Terminal effector memory CD4 T-cell nTPM: 5.7
Samples: 2
Max nTPM: 7.4
Min nTPM: 3.9
RHH5243_R3615
3.9
RHH5272_R3644
7.4
Terminal effector memory CD8 T-cell nTPM: 3.1
Samples: 4
Max nTPM: 5.7
Min nTPM: 1.3
RHH5232_R3604
5.7
RHH5204_R3575
2.7
RHH5261_R3633
2.7
RHH5296_R3662
1.3
Vd2 gdTCR nTPM: 4.8
Samples: 4
Max nTPM: 6.5
Min nTPM: 3.5
RHH5234_R3606
6.5
RHH5206_R3577
3.5
RHH5263_R3635
4.8
RHH5298_R3664
4.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
