HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.6 nTPM
HPA Brain:30.9 nTPM
GTEx:12.6 nTPM
FANTOM5:48.7 Scaled Tags Per Million
Pig:11.5 nTPM
Mouse:16.2 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049388
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.0
2621 Female, age 67, right hemisphere 28.3
2529 Female, age 94, left hemisphere 26.6
1911 Female, age 85, right hemisphere 26.5
2148 Female, age 91, left hemisphere 25.7
1855 Male, age 76, left hemisphere 24.6
1898 Male, age 80, left hemisphere 24.3
Dentate gyrus
nTPM: 26.1
2531 Female, age 67, both hemispheres 29.9
2530 Female, age 94, left hemisphere 27.4
1927 Female, age 91, both hemispheres 26.4
2246 Female, age 85, both hemispheres 24.6
2010 Male, age 76, both hemispheres 24.2
2528 Male, age 74, both hemispheres 23.9
Entorhinal gyrus
nTPM: 30.9
2613 Female, age 94, left hemisphere 32.9
2686 Male, age 75, right hemisphere 32.8
2764 Male, age 80, right hemisphere 32.7
1787 Male, age 76, left hemisphere 30.7
2117 Female, age 91, right hemisphere 29.3
1938 Female, age 85, left hemisphere 27.3
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 28.7
2045 Male, age 76, both hemispheres 26.0
1873 Female, age 85, both hemispheres 25.1
2082 Female, age 91, right hemisphere 23.7
2527 Male, age 74, both hemispheres 23.2
Hippocampus, CA2
nTPM: 26.1
1940 Female, age 85, left hemisphere 27.1
2113 Female, age 91, right hemisphere 26.7
2249 Male, age 74, both hemispheres 26.2
1963 Male, age 80, left hemisphere 26.1
1892 Male, age 76, both hemispheres 25.6
2437 Female, age 94, left hemisphere 24.7
Hippocampus, CA3
nTPM: 27.1
2620 Female, age 94, left hemisphere 30.6
2861 Female, age 67, both hemispheres 30.3
1891 Female, age 85, both hemispheres 27.9
2137 Male, age 80, left hemisphere 25.4
1867 Male, age 76, both hemispheres 25.0
2436 Male, age 74, both hemispheres 23.6
Parahippocampal cortex
nTPM: 29.2
2622 Female, age 67, right hemisphere 34.9
1990 Female, age 91, right hemisphere 31.3
2532 Female, age 72, left hemisphere 30.7
2245 Female, age 91, both hemispheres 29.5
2693 Female, age 94, both hemispheres 29.0
1850 Male, age 80, both hemispheres 28.4
1933 Female, age 85, both hemispheres 27.7
2250 Female, age 67, right hemisphere 27.7
2018 Male, age 76, both hemispheres 26.8
2692 Male, age 74, both hemispheres 25.8
Perirhinal gyrus
nTPM: 27.5
2848 Male, age 76, right hemisphere 31.3
1841 Female, age 85, right hemisphere 27.3
1794 Male, age 80, right hemisphere 26.6
1847 Female, age 91, left hemisphere 26.4
2521 Female, age 94, right hemisphere 26.2
Subiculum
nTPM: 27.6
1977 Female, age 85, both hemispheres 30.9
2619 Male, age 74, both hemispheres 27.9
2729 Female, age 91, right hemisphere 27.6
2042 Male, age 76, both hemispheres 27.3
1901 Male, age 80, both hemispheres 27.1
2438 Female, age 94, left hemisphere 24.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.6
Samples: 197

Max nTPM: 21.8
Min nTPM: 8.1
Std nTPM: 1.9
Median nTPM: 12.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 21.8
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 20.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 18.4
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 18.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 17.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 16.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 16.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 16.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 16.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 15.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.7
FF:10153-102I9 76 years, female 50.7
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.5
Pig sample Sample description nTPM
Subiculum
nTPM: 10.2
Samples: 4

Max nTPM: 12.2
Min nTPM: 8.8
Sample A Female 12.2
Sample B Female 9.9
Sample C Male 9.9
Sample D Male 8.8
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 12.8
Min nTPM: 9.8
Sample A Female 12.7
Sample B Female 10.7
Sample C Male 12.8
Sample D Male 9.8
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.4
Sample A Female 11.4
Sample B Female 10.5
Sample C Male 9.4
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.0
Sample A Female 11.2
Sample B Female 9.0
Sample C Male 13.7
Sample D Male 10.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.5
Samples: 4

Max nTPM: 18.3
Min nTPM: 13.9
Sample A Male 14.6
Sample B Male 15.2
Sample C Female 13.9
Sample D Female 18.3
Hippocampal formation
nTPM: 16.2
Samples: 4

Max nTPM: 19.1
Min nTPM: 13.7
Sample A Male 16.2
Sample B Male 15.8
Sample C Female 19.1
Sample D Female 13.7

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